Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0721 |
Symbol | |
ID | 5198317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 797255 |
End bp | 799363 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640580265 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001261226 |
Protein GI | 148553644 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00760072 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCTTG TCCGGTCCAG GCTATCAGGA GCGAGAAGCG TGAAATTCAA GGCGGTTTCA GCGGCCATGC TGGTGGTCGC ACTGGCGTCG TGCGCGCCCC GGAAGGCGGC CAATGTCGAT TGGGCGCTGC ATGGCCAGGA CGCGGGCGAG AAGCGGTTCA GCGACCTCGG AGAGATCACG CCCGCCAATG TCGGCCAGCT CGGCGTCGCC TGGTATGCCG ATTTCGACGC GCGCTCGCTG CGCGGGGTGG AGGGGACGCC GCTGGTCGTC GACGGCGTCA TGTACGCCTC CGGCCCGTGG AGCAAGGTGA TCGCGCTCGA CGCGCAGAGC GGCAAGAAGC TGTGGGAATA TGATCCGCAG TTCGACGGGG CGATCGCGCG GCGCGCCTGC TGCGACGTGG TCAATCGCGG CGTCGCCTAT GCCGACGGCA AGGTGTTCGT CGGCGTCCTC GACGGCCGGC TGGTCGCGCT CGACGCGAAG ACCGGCAAGC CGGTGTGGAC GGTGCAGACC ACCGACACGA CCAAGTCCTA CACGGTCACC GGCGCGCCGC GCATCGTCAA GGACAAGGTG GTGATCGGCA ATGGCGGCGC CGAATATGGC GTGCGCGGCT ACGTCACCGC CTATGACGTC GCGACCGGCA AGCAGGCGTG GCGCTTCTAC ACCATCCCCG GCGACCCGAA GAAGGGCTTC GAGAACGACG CCATGGCGAT GGCCGCCAAG AGCTGGAACG GGGAGTGGTG GAAATATGGC GGCGGCGGCA CCGCCTGGGA CTCGATGGCC TATGATCCCG AGCTCGACCT GCTCTACATC GGCGTCGGCA ATGGCGGCCC CTGGGATCGC GCCGTGCGCA GCGCCGGCAA GGGCGACAAC CTGTTCCTGT CGTCGATCGT GGCGGTGCGT CCCTCGACCG GCGAATATGT CTGGCACTTC CAGGAGGTGC CCGGCGACGA ATGGGATTAT ACCGCCACCC AGCACATGAT CCTCGCCGAC CTCGAGATCG ACGGCAAGCC GCGCAAGGTG CTGATGCAGG CGCCCAAGAA CGGCTTCTTC TACGTGCTCG ACCGGACCAA CGGCGCCTTC ATCTCGGGCA CGCCCTATGT CCCCGTCACC TGGGCGAAGG GCCTCGATCC CAAGACCGGC CGTCCCGACA TCGTGCCCGA GGCGCGCTAT AGCGGCACCG GTAAGCCCTT CCTCGGCATG CCGTCGCCGG CTGGCGGACA TGGCTGGCAG CCGATGAGCT TCAACCCGAA GACCGGCCTC GTCTACCTGC CGACCGCTGA GATTCCCTAT GGCTATATCT CCGGCAAGAC GGAGGATTTC CGCTTCGACC CGCGCGGCTG GAACACTGGG CAGGACCCGG GCAAGACCGC GATGCCCGAG GACCCGGCGA TCCGGCGGCA GATTCGCGGG ATGATGGGCG GCGCGCTCGT CGCCTGGGAC CCGAAGGCGC GCAAGCGGGT CTGGTCGGTG CCGATGCCTC TGCCGTGGAA CGGCGGCGTG CTGTCGACCG CGGCGGGCCT GGTCTTCCAG GGCAACGGCA CCGGCGACTT CGCCGCCTAT GACGCGACCA GCGGCAAGAA GCTCTGGTCG ATGCCGATGG GGTCGGGGAT CGTCGCCCCG CCGATCACCT ATTCGGTCGC CGGGGTCCAA TATGTCTCGG TCGCGGTCGG TTGGGGCGGC ATCCTGCCGC TCAACATGGG CGAGGCGCTC CAGGCCTCGG TGAAGCCCAA GGTCAATCGC GTCGTGACCT TCCGCATCGG CGGCAAGGCG CCGCTGCCGC TGCCGGCGAA GGAGGCCGAG GCGCCGCTCG CCCCGCCGCC CTCGACCGCC TCCGCCGCCG TGATCGAGCA GGGACGGGTG CTCTACCATG TCCGCTGCTG GATGTGCCAT GGCGACACCG TCGTGAACCA TGGCGGGGTT CCCGACCTGC GCCGCTCGAT GGTGATCGCG GACGCGGCGG CCTTCCGCGG CTTCGTCCTC GAAGGGGCGG CCGAGCCGCT CGGCATGCCC AATTTCTCGA AGGACCTGAA GCCCGACGAG GTCGAGGCGA TCCGCGCCTA TGTCATCAAG CGTGCCAACG ACTTGAAGGC CGATCCTAAG ATGCCGTGA
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Protein sequence | MSLVRSRLSG ARSVKFKAVS AAMLVVALAS CAPRKAANVD WALHGQDAGE KRFSDLGEIT PANVGQLGVA WYADFDARSL RGVEGTPLVV DGVMYASGPW SKVIALDAQS GKKLWEYDPQ FDGAIARRAC CDVVNRGVAY ADGKVFVGVL DGRLVALDAK TGKPVWTVQT TDTTKSYTVT GAPRIVKDKV VIGNGGAEYG VRGYVTAYDV ATGKQAWRFY TIPGDPKKGF ENDAMAMAAK SWNGEWWKYG GGGTAWDSMA YDPELDLLYI GVGNGGPWDR AVRSAGKGDN LFLSSIVAVR PSTGEYVWHF QEVPGDEWDY TATQHMILAD LEIDGKPRKV LMQAPKNGFF YVLDRTNGAF ISGTPYVPVT WAKGLDPKTG RPDIVPEARY SGTGKPFLGM PSPAGGHGWQ PMSFNPKTGL VYLPTAEIPY GYISGKTEDF RFDPRGWNTG QDPGKTAMPE DPAIRRQIRG MMGGALVAWD PKARKRVWSV PMPLPWNGGV LSTAAGLVFQ GNGTGDFAAY DATSGKKLWS MPMGSGIVAP PITYSVAGVQ YVSVAVGWGG ILPLNMGEAL QASVKPKVNR VVTFRIGGKA PLPLPAKEAE APLAPPPSTA SAAVIEQGRV LYHVRCWMCH GDTVVNHGGV PDLRRSMVIA DAAAFRGFVL EGAAEPLGMP NFSKDLKPDE VEAIRAYVIK RANDLKADPK MP
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