Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0720 |
Symbol | |
ID | 5198316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 796023 |
End bp | 797234 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580264 |
Product | major facilitator transporter |
Protein accession | YP_001261225 |
Protein GI | 148553643 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00588429 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGCCA CCAAAGCCGC CCCGCCCCGT GTCGAGACCG ACGGCACCGT GTTCGGCATC ATCGCCGCGA TCAGCCTGTG CCATCTGCTC AACGACATGA TGCAGTCGCT GCTGCCGTCG ATCTATCCCA ACCTGAAGGC GGAACTCGGC CTGTCGTTCA GCCAGGTCGG GCTGGTGACG CTGGTCTATC AGATGACCGC CTCGATCCTG CAACCGCTGG TCGGGCTCTA TGCCGACAAG CGGCCGACCC CGCTCGCCCT GCCCGGCGGC ACGCTGTTCT CGCTGGCTGG GCTGATGCTG CTGTCGGTCG CGCACAGCTA TGGGCTGCTG CTGGTCGGCG CGGCGCTGCT GGGGATGGGG TCGTCGGTGT TCCACCCCGA ATCCTCGCGC GTGGCGCGGA TGGCGGCGGG CCGCCGGCTC GGCCTGGCCC AGTCGATGTT CCAGGTCGGC GGCAATGCCG GGTCGGCGCT CGGCCCGCTC GCGGCGGCGA TCGTGGTGCT GCGCTGGGGC CAGTCGAGCC TCGCCTTCTT CGCGATGCTG GCCCTGCTGT CCTGCGCGAT CCTGTGGAAC GTCAGCCAAT GGTATCGCCA CCACGGCCTC GCCCGCCTGT CGCGCGGCCA TGCCGGCCGG CAAGCGGCCC CGCCGCTGCC GCGCGGCAAG GCACTGACCG GCATCGCCAT CCTGCTCGCG CTGATCTTCT CGAAATATTT CTACCTGGCG AGCATCACCA GCTATTTCAC CTTCTACCTG ATCCAGCGCT TCGGCGTCAG CGTCGAGGTG GCGCAGCTCC ATCTGTTCGT CTTCCTCGGC GCGGTGGCGG TGGGGACGAT CGCCGGCGGC CCGCTCGGCG ACCGCTTCGG GCGCAAATAT GTGATCTGGT TCTCGATCCT CGGCGCGCTG CCCTTCACGC TGCTGCTGCC GCATGCCAGC CTGTTCTGGA CCGGGCCGCT GACGGTGATC ATCGGCCTGA TCCTCGCCTC GGCCTTCCCC GCGATCGTCG TGTTCGCGCA GGAGCTGGTG CCGGGGAAGC CGGGGATGAT CTCCGGCCTG TTCTTCGGCT TCTCCTTCGG CATGGCCGGG CTGGGCGCGG CGATACTGGG CGAGGTCGCC GACCTGGCGG GGATCGAGAT GGTCTACGCC ATCTGCGCCT TCCTGCCGGT GATCGGCCTG CTCGCCGTGT TTCTGCCCGA TCCCGAACGC GACCGGGGCT GA
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Protein sequence | MNATKAAPPR VETDGTVFGI IAAISLCHLL NDMMQSLLPS IYPNLKAELG LSFSQVGLVT LVYQMTASIL QPLVGLYADK RPTPLALPGG TLFSLAGLML LSVAHSYGLL LVGAALLGMG SSVFHPESSR VARMAAGRRL GLAQSMFQVG GNAGSALGPL AAAIVVLRWG QSSLAFFAML ALLSCAILWN VSQWYRHHGL ARLSRGHAGR QAAPPLPRGK ALTGIAILLA LIFSKYFYLA SITSYFTFYL IQRFGVSVEV AQLHLFVFLG AVAVGTIAGG PLGDRFGRKY VIWFSILGAL PFTLLLPHAS LFWTGPLTVI IGLILASAFP AIVVFAQELV PGKPGMISGL FFGFSFGMAG LGAAILGEVA DLAGIEMVYA ICAFLPVIGL LAVFLPDPER DRG
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