| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0717 |
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| Symbol | fbiC |
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| ID | 5199479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 792109 |
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| End bp | 794448 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580261 |
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| Product | FO synthase |
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| Protein accession | YP_001261222 |
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| Protein GI | 148553640 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00851827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACCG GACATGATCT CGATCGACGG GGCGCCGACG CCATCCTGAC GCGGCTCGAC
GCGATGGGCC TCGCGCGGAT GATCGCGGAG AGCGAGGCGA TGACCCTCGC CGCGCACGGG
CCGATCGTCA CCTATTCGCG CAAGGTGTTC ATTCCGCTGA CCCGGCTGTG CCGCGACGTC
TGCCATTATT GCACCTTCGC CACCACCCCG CGCCAGGCCG GCCCCGCCTA TCTGAGCCGC
GACGAGGTGC TGGCGATCGC CCGCGCCGGG GAGGCGGCCG GGTGCCGCGA GGCGCTGTTC
ACGCTCGGTG ACCGACCCGA GGACCGCTAT GCGGCGGCGC GCGAGGCGCT GGCGGCGAGC
GGCCATGCCA GCACCCTCGC CTATCTTCGC GACATGGCGC GGGCGGTGCT CGACGAGACC
GGCCTGCTGC CGCACCTCAA TCCCGGCCTG ATGGACGCCG ACGACTATGC CGCGCTGCGC
CCGGTGTCGG CGTCGATGGG GATCATGCTC GAAAGCGCGT CGGACCGGCT GTGCGAGCCG
GGCGGGCCGC ATTTCGGATC GCCCGACAAG CGCCCCGCCG CGCGGATCGC GACGATCGAG
GCGGCCGGGC GCGCCGGCGT GCCCTTCACC ACCGGCCTGC TGATCGGCAT CGGCGAGACC
CGCGCCGAGC GGATCGAGGC GCTGGTCGCG ATCCGCGACC TGCACGCGCG CCACGGCCAT
ATCCAGGAAG TCATCGTCCA GAATTTCCGC GCCAAGCCCG ACACCCGCAT GGCCGGCCAT
GCCGAGCCGT CGCTCGACGA GCATCTCTGG ACGATCGCCG CCGCCCGGCT GGTGCTCGGC
CCCGCCATGA CGATCCAGGC GCCGCCCAAC CTCCACGACC GCGCCGAGCT GACCGCGCTG
CTGCGCGCCG GGGTCAACGA CTGGGGCGGC GTGTCGCCGG TCACCCCCGA CCATGTGAAC
CCCGAGGCGC CCTGGCCGCA TCTGGAGGTG CTCGCGGAGG CGACCGCCGA GGCGGGACGC
ACCCTGCTCC AGCGGCTCGC GATCGGCCCG GCCCATGCCC GCGCGGTCGA CCGCTGGGCC
GATCCGGCGC TCGCCACCCG CATCCGCCGC CTCGTCGACG GGCGCGGCCT GCCCAAGACC
GACGACTGGG CGGCGGGCGA AGGCGGCGCG GTGCCCGCGA TCGGGCTCGA TGCCGAACCG
AAGGCGACCG CCGGGATCGC CGCGATTCTC GCCAAGGCAG GATCGGGCGC GACGCTCGAC
GAAGGCGAGA TCGTCGCGCT GTTCCGGGCC GAGCGCGGCG ACCTCGCCGC GATCGTCCGC
ACCGCCGACG AACTGCGGCG GCAGGTCAAT GGCGACCGCG TCAGCTATGC CGTCAACCGC
AACATCAACT ACACCAACAT ATGTCTATAC AAATGCGGCT TCTGCGCCTT TTCCAAGGGA
TCGACCAAGG CCGAGCGCGG TCCCGCCTAT CGGCTCGACC TCGATGAGGT CGGCCGCCGC
GCCGCCGAGG CGGCCGAGCG CGGCGCGACC GAGGTGTGCC TGCAGGGCGG CATCCATCCG
AGCTTCGACG GCGACACCTA TCTCGCCATC GTCGCTGCCG TCCGCGCCGC CGCGCCGTCG
ATCCACATCC ACGCCTTCTC CCCGCTCGAA GTCACCCATG GCGCGCAGAC GCTCGGACTC
CCGCTCGAGG ATTATCTAGC GCGGCTGAAG GCGGCCGGTC TCTCGACCCT GCCCGGCACC
GCCGCCGAGA TCCTCGATCC CGAGGTCCGC GCGATCCTCT GCCCCGACAA GCTGACCGCC
GACGAGTGGA TCGAGGTGAT GCGGACCGCG CACGGCGTCG GCCTGCGCAG CACCGCGACG
ATCATGTTCG GCCATGTCGA CGGCTATGAG CATTGGGCCC GCCATCTGCT GCGGGTCCGC
GCCTTGCAGA CCGAGACGGG CGGCTTCACC GAGTTCGTCC CCCTGCCCTT CGTCCATATG
GAGGCGCCGC TGTGGCGCAA GGGCAAGGCG CGCTCGGGCC CCAGCTATCG CGAGGCGGTG
CTGATGCACG CTGTCGCGCG GATCGTGCTG CACCCGGTCA TCGCCAACAT CCAGACGAGC
TGGGTGAAGA TGGGTCCCGA CGGCGCGCGC GCGATCCTGG ACGCCGGCGC CAACGACCTG
GGCGGCGTGC TGATGGACGA ATCGATCACG CGCTCGGCCG GCGGCCAGAA CGGCCAGTGC
TTCGATCGCG CGCAGATGAT CGCGCTCGCC GCCGACGCCG GCCGGCCGGC CTATCAGCGC
ACCACGCTTT ACCAGCCGGT CGATCCGCGG CCGGCCCCCT TCCTGGAGCC TCTTGCATGA
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| Protein sequence | MATGHDLDRR GADAILTRLD AMGLARMIAE SEAMTLAAHG PIVTYSRKVF IPLTRLCRDV
CHYCTFATTP RQAGPAYLSR DEVLAIARAG EAAGCREALF TLGDRPEDRY AAAREALAAS
GHASTLAYLR DMARAVLDET GLLPHLNPGL MDADDYAALR PVSASMGIML ESASDRLCEP
GGPHFGSPDK RPAARIATIE AAGRAGVPFT TGLLIGIGET RAERIEALVA IRDLHARHGH
IQEVIVQNFR AKPDTRMAGH AEPSLDEHLW TIAAARLVLG PAMTIQAPPN LHDRAELTAL
LRAGVNDWGG VSPVTPDHVN PEAPWPHLEV LAEATAEAGR TLLQRLAIGP AHARAVDRWA
DPALATRIRR LVDGRGLPKT DDWAAGEGGA VPAIGLDAEP KATAGIAAIL AKAGSGATLD
EGEIVALFRA ERGDLAAIVR TADELRRQVN GDRVSYAVNR NINYTNICLY KCGFCAFSKG
STKAERGPAY RLDLDEVGRR AAEAAERGAT EVCLQGGIHP SFDGDTYLAI VAAVRAAAPS
IHIHAFSPLE VTHGAQTLGL PLEDYLARLK AAGLSTLPGT AAEILDPEVR AILCPDKLTA
DEWIEVMRTA HGVGLRSTAT IMFGHVDGYE HWARHLLRVR ALQTETGGFT EFVPLPFVHM
EAPLWRKGKA RSGPSYREAV LMHAVARIVL HPVIANIQTS WVKMGPDGAR AILDAGANDL
GGVLMDESIT RSAGGQNGQC FDRAQMIALA ADAGRPAYQR TTLYQPVDPR PAPFLEPLA
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