| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0714 |
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| Symbol | |
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| ID | 5197096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 786827 |
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| End bp | 789169 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580258 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261219 |
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| Protein GI | 148553637 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.116243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000166351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAGC ATTCACATCT TGGCTGGACC AAGTCGTCGG TTGCCGTCGC AGCGCTGATG
CTGCCGGCGA TCGCCCTCGC CCAGGCCGAG CAGCCGGCCG AGGAGCAGTA TAGCGGCGAC
ATCGTCGTCA CCGCGACCCG CCAGTCCGAA TCGCTGAGCA AGGTGCCGCT GAGCGTCAGC
GCCTTCTCGC AGGAGAAGCT CGACAGCCGC GGCGTCCGGA ACTTCGCCGA CGTGATCCGC
CAGACGCCGG GCGTCGTGTT CCAGGCGACC AACAACACCA CCAACATCTC GATCCGCGGC
ATCAACTCGA CCGCCGGCGC CGCCACCACC GGCGTCTATA TCGACGACAC GCCGATCCAG
ATCCGGTCGC TCGGCTATAG CGGCGGCAAC ACCTATCCGG TGATCTTCGA CCTGGAGCGC
GTCGAGGTTC TGCGCGGTCC GCAGGGCACG CTGTTCGGCG CCGGTTCGGA AGGCGGCACG
ATCCGCTTCA TCTCGCCGCA GCCGAGCACG ACCAAGTCGT CGGGCTATGC GCGCACCGAA
TTCGCGATGA CCGAGGATGG CGGCCCGAGC TACGAGGCCG GCCTCGCCCT CGGCGTTCCG
CTGATCCAGG ACAAGCTGGG CGTTCGCGTC AGCGGCTATT ATCGCCGCGA CGGCGGCTGG
ATCGACCGCG TCCGCTTCGA AGACAAGGGC GTGGTCACCG ACGACGCCAA CTATCAGAAC
AGCTATGTCG GCCGCATCGC CTTCGTCTGG GAGCCGACGC CCGAGCTGAA GATCACGCCG
TCGATCGCCT ATCAGAAGGT CTATAACAAC GACAGCACCG ATAGCTGGGA CAATGTCCGC
ACCTCGCTCG CCACGCCGGA CGCGCAGTTC TCCAACTATG ACAAGGGCGA GTTCCTGAAC
GGCAACCGGG TGCCGGAATC GGGCCGCGAC CGCTTCTACC TGCCGACGCT CAACATCCAA
TATGCGTTCG GCCCGGTCGA CCTGACCGCG ATCGCCTCCT ATTTCGATCG CAAGCAGAAC
TTCCAGTCGG ACTACACCAC GTTCGACCAG AGCCTGTTCA CCGGCATCAC CCTGCCACTC
TTCGCCAACC AGCGGGCGTT CAGCGCGTTC GAGAACACCC AGAAGGTGAC GACGGGCGAA
CTTCGCCTCG CCTCCACGGA CCGCGACGCA ATGCTCACCT GGCAGGTCGG CGGCTTCTAC
CAGAAGGCCA AGCAGACCTC GATCCAGCAG GTCGACGATC CGTTCATCTT CCAATATGCG
CCCGCGCTGC AGGCGGTGTT CCCGCCGCTG GTCAACGGCC GCCTGATCTA CGACCAGTCG
ACCAGCTCGA AGGACGAGCA GATCGCCGCC TTCGGCCAGG TCAACTTCAA GCCCGTCGAC
CGGCTGACGC TGACGGTGGG CCTGCGCTAC GGCCAGACCA AGTTCACCAT CAACTCCTTC
GCGCAAGGGC CCGTCGTCGG CCCGTCGGTG ACCGACGTCG GCCGCCAGAA GGAGAAGCCG
TTCACGCCGA AGTTCGGCGC CGAGTTCCAG GTGACGCCGA GCACGCTGGT CTACGCCTCG
GCCTCGAAGG GCTTCCGCCC GGGCGGCTAC AACCCGCAGG TCGGCGTCCC CTGCCAGGCG
AGCAACCTCA ACGCGCTCGG CTATCCGAAC GGTCGCCCGC AGACCTATAA TTCGGACTCG
GTGTGGAGCT ACGAGCTCGG CCTGAAGACT CGCACCAGCC GCTTCAGCGC GCAGGGCAGC
GTCTACCAGA TCGACTGGAA GAACATCCAG CAGGTCGTCG GCCTCGGCGC CTGCGGCTTC
CAGTTCACCT CCAACCTGGG CTCGGCGCGG AGCCGCGGCC TCGACATCCA GCTCGACTAT
CGCCTGACCG ACGATTTCAC CCTGCAGGCG GAGATCGGCT ACACCAACGC CAAGTTCCTC
GACACCGTGT TCGGCGGTCC GCTCGCCACG GTGCCGCTGG TGACCAAGGG CAACCATGTG
GTGTCGCCGC CGTGGACGGT GTCGCTGCAC GGCCAGTATG AGCTGTCGCT GCGCGACCAT
CATGACTCGT ACATCCGCGC CGACTTCGAC TATCGCTCGC ACCAGTCGGA CCTGATCCCG
GGGATCGATC CGCGCAACGG CGGTTCGGAC CCGACGCTGA GCACCGCGCC CGCGCTCAAG
GCGCTGTCGA TGCGGATCGG CCACCGGATC GACGGCATCG ACATGTCGCT GTTCGTCAAC
AACCTGCTCG ATCAGGCCGT CTGGCAGGGC TACCGCGCCC GCGACAACAA CCGGGGCGCC
GTCTATCGCT CCTATGTGGT GCGCCCGCGC ACCTTCGGCG CGACGATCGG CTACCGCTTC
TGA
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| Protein sequence | MKKHSHLGWT KSSVAVAALM LPAIALAQAE QPAEEQYSGD IVVTATRQSE SLSKVPLSVS
AFSQEKLDSR GVRNFADVIR QTPGVVFQAT NNTTNISIRG INSTAGAATT GVYIDDTPIQ
IRSLGYSGGN TYPVIFDLER VEVLRGPQGT LFGAGSEGGT IRFISPQPST TKSSGYARTE
FAMTEDGGPS YEAGLALGVP LIQDKLGVRV SGYYRRDGGW IDRVRFEDKG VVTDDANYQN
SYVGRIAFVW EPTPELKITP SIAYQKVYNN DSTDSWDNVR TSLATPDAQF SNYDKGEFLN
GNRVPESGRD RFYLPTLNIQ YAFGPVDLTA IASYFDRKQN FQSDYTTFDQ SLFTGITLPL
FANQRAFSAF ENTQKVTTGE LRLASTDRDA MLTWQVGGFY QKAKQTSIQQ VDDPFIFQYA
PALQAVFPPL VNGRLIYDQS TSSKDEQIAA FGQVNFKPVD RLTLTVGLRY GQTKFTINSF
AQGPVVGPSV TDVGRQKEKP FTPKFGAEFQ VTPSTLVYAS ASKGFRPGGY NPQVGVPCQA
SNLNALGYPN GRPQTYNSDS VWSYELGLKT RTSRFSAQGS VYQIDWKNIQ QVVGLGACGF
QFTSNLGSAR SRGLDIQLDY RLTDDFTLQA EIGYTNAKFL DTVFGGPLAT VPLVTKGNHV
VSPPWTVSLH GQYELSLRDH HDSYIRADFD YRSHQSDLIP GIDPRNGGSD PTLSTAPALK
ALSMRIGHRI DGIDMSLFVN NLLDQAVWQG YRARDNNRGA VYRSYVVRPR TFGATIGYRF
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