Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0710 |
Symbol | |
ID | 5197092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 781355 |
End bp | 782719 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580254 |
Product | major facilitator transporter |
Protein accession | YP_001261215 |
Protein GI | 148553633 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00331318 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATAGGC CGGTCGAGCT TCCGGCCATG GCGATGGCGC TTCCGGCGCA GCCCGGCCCC GCATCCGCGC CCGGCAAGGC CGCGCGCTAT GGCTGGTACG TCGTCGGCGT CCTCGTGCTC GCCTATATCG CGGCCTTCCT CGACCGGCAG ATATTGAGCC TGCTGGTCGG GCCGATCAAG CGCGACATCG GCATCTCCGA CGTCCAGATC GGCCTGTTGC AGGGGCTGGC CTTCGCGATC TTCTATTCGA CCTGCATCCT GCCGGCCGGA TGGCTGGTCG ACCGGTTCAA CCGGCGCAAC ATCCTCGCCA TGGCGCTGGC GATCTGGTGC CTGATGACGA TCGCCTGCGG GCTGTCGCGC AGTTTCCCCG AGCTGTTCAT GGCGCGGATG GGCGTGGGCA TCGGCGAAGC CGTGCTGGGC CCCGCCGCCT TCTCGCTGAT CAGCAATTAT TTCGCGAAGG ACCGGCTGCC GCTGGCGATC AGCGTCTATT CGATCGGCGG CTCGCTCGGG GCCGGCCTCG CCTATATCTT CGGCGCCTTC GCCGAGCGGA TGGCCGCGCC GGCGACCGCG GCGCTGCCCT TCCTCCAGGG TTTCGCGCCA TGGCAGGCCG CCTTCTTCAT CGTCGCCGCG CCGGGCTTCG CGATCTCGCT GCTGATCCTG ACGATCCGCG AGCCGGCGCG CGCGCGGGTG GCGGGCGCGC AGGGCGGACC CTCCCTCCGC GCCTTCCTGT CGCCGCGCAG CCGCTTCCTG GCGCATTATT GCCTCGGCAT CGGGCTGCTC ACCAGCGTCA GCTATGCGAA CATGGCCTGG ATTCCGGCGA TGTTCGAGCG GACCTATGGC TGGGCGACGG CCGACACTGC CCGCTGGCTG GGGCTGATGA TGCTCGTCTT CGGGACGGCC GGCATCCTGG CGGGCGGCAT GGGGGCGATC CGGCTGTCGC GGCGCCACGC CGACGCGACC CTGCGGCTGG CGGCGATCAT CGCGCTGGTG CTCGCGCCGA TCTGCCTGGT CGCGGCGATC GCCGGCAACC CCTATCTGTC GCTGGCGCTC TACGTGCCCT TCACCTTCCT TTCGACCTCG TTCGTGTCGC TCGGCCCGAC GGCGATCCAG CTGATCACGC CCGACGCGCT GCGCGGGCGC GTCAACGGCA TCGCGCTGAT GCTGGTCAAT ATCATCGGGA TATCGGTCGG CCCGCTGGTG GTGGCGCTGC TGACCGATCA TCTCTTCGGC CGGGAAGCGA TGCTGCGCTG GGGACTGGGC ATCGGCAGCG GCCTGCTGTC GCTGACCGCC GGCCTGTGCC TGCTGACCGG ACTTTCCGCC TATCGCCGCG TCCTGCGGGA CGCCTCGGAC ATAGAGGAGG CATAG
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Protein sequence | MDRPVELPAM AMALPAQPGP ASAPGKAARY GWYVVGVLVL AYIAAFLDRQ ILSLLVGPIK RDIGISDVQI GLLQGLAFAI FYSTCILPAG WLVDRFNRRN ILAMALAIWC LMTIACGLSR SFPELFMARM GVGIGEAVLG PAAFSLISNY FAKDRLPLAI SVYSIGGSLG AGLAYIFGAF AERMAAPATA ALPFLQGFAP WQAAFFIVAA PGFAISLLIL TIREPARARV AGAQGGPSLR AFLSPRSRFL AHYCLGIGLL TSVSYANMAW IPAMFERTYG WATADTARWL GLMMLVFGTA GILAGGMGAI RLSRRHADAT LRLAAIIALV LAPICLVAAI AGNPYLSLAL YVPFTFLSTS FVSLGPTAIQ LITPDALRGR VNGIALMLVN IIGISVGPLV VALLTDHLFG REAMLRWGLG IGSGLLSLTA GLCLLTGLSA YRRVLRDASD IEEA
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