Gene Swit_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0707 
Symbol 
ID5198180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp776270 
End bp776710 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID640580251 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001261212 
Protein GI148553630 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.117656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00673639 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGACG CCATCGTCGC GACTGTCGAG CATCGCTTCG CCGGCAAGAC GCCCGACCAG 
CTCTTCCGCG CCTGGATCGA TCCGGCGCTG CTGCCGCAAT GGCTGGCGCC CGATCCCTAC
GACCTGGTCC ATGCCGAGGT CGAGGCGGCG CCGGGCGGCC ATTACCGCCA CGACATCGTC
GGCCCCGACG GCAGGCATGT CGTGATCGGG GAGTTCCTGC GCTTCGATCC GGGGCGGGGG
CTCCGCAAGA GCTGGAACTA TCGCGGGCCC AATCCCGCTC CGCGACCCGA GCCGACCTTC
GTCGACGTCA CCATCGAACC GGAGGAGGGC GGCAGCCGCC TCGTCCTCAC CCATAGCGGC
CTGCGCGATC AGGCGGAGTG GAACCATTAT GACGGCGGCT GGAGGGTTTG CTTCGATCGG
TTGGACAAGT TGAGCCTGTA A
 
Protein sequence
MTDAIVATVE HRFAGKTPDQ LFRAWIDPAL LPQWLAPDPY DLVHAEVEAA PGGHYRHDIV 
GPDGRHVVIG EFLRFDPGRG LRKSWNYRGP NPAPRPEPTF VDVTIEPEEG GSRLVLTHSG
LRDQAEWNHY DGGWRVCFDR LDKLSL