Gene Swit_0699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0699 
Symbol 
ID5197476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp764732 
End bp766966 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content72% 
IMG OID640580243 
Productsignal transduction histidine kinase 
Protein accessionYP_001261204 
Protein GI148553622 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.324444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.102548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CGGACGAGAC CGAGCTGGAG GCGCTGCGCG AGGAATTGCG CAAGCTGCGC 
AAGATCAACG CCGCGCTGAT CGACCGGGTC GAGCGCTCGA CCGACATGGC CGGCAACGCC
TTCTCGATGT TCGAGACCGC GATCTCGCTG GAGGCGATGG TGCGCGACCG CACCTCGCAG
CTCGAGGATG CGCTGGCCAA GCTGGCGCAG GCCAATGCCG ATCTCGCCCG CGCCCATGGC
CTCGCCGACG CGGCGCGAAT GCGGCTGCGC GACGCGATCG ATTCGATCAA CGAGGGCTTC
GTCCTGTTCG ACGCCGAGGA TCGGCTGGTG CTGTTCAACG AGGCCTATCT CGGCTTCTGG
CCGGCGCTGG CCGGGCAGGT GCGCGAGGGG ATGAGCTTCG ACGAGATCGC CCGCCTCGCC
GCCGAGCGGG AGCGGCCGGG CGGATCGCTG GTCGCGCCCG ACCGCTGGGT GTCGGACCGG
CTGGCGCGGC ACGGCATCGC CGATGGCGGC CATGTCCAGG CGCTGGCCGA CGGCCGCTGG
GTCCAGATCA ACGAGCTGCG CACCAGCGAG GGCGGCATCG TCGGCATCTA CACCGACATC
ACCGAGGCCA AGGCCGAGGA CGCCCGCGAA CGCGCGCGCG AGCTGGCCGA GCGCAACCTG
GTGCTGCAAT CGACGCTCGA CAATCTCTCC GAGGGCGTCT GCGTGTTCGA CGATGCCGGC
CGGCTCAGCG CGTGGAACGA GGCGCTGCAA CGCATCCTGC GCCTGCCCGA CGGCTGGACG
CAGGCGATCG CCGATCATCA GGGGCTGGTC GACTGGTGTC GGACCCGGCT CGGCATGCGC
GACAAGGGCT GCCTCGACTG GCGCGGGGAC AGCGCCGGGG CTGGGCGCAT CGAACGGCTC
TGCCCGGCCG GCGACCGCAG CTTCGAGGTG CGCAGCACGG CGATGGAGCG CGGCGGGCAG
GTGATCGGCT TCACCGACGT CACCGATGTC CAGCGCGCCC AGGCCAGCCT GCGCGAGACC
GCCGACACGC TCGAACGCCG CGTGTCGGAA CGGACCGGCG AGCTGGTCGA GGTCAACCGC
CGGCTGGAGG CCGAGGTCGC CGAGCGCCGT TCGATCGAGG CCGCGCTGCT CGACGCCAAG
ACCGTGGCCG AGAAGGCCAA CCTGTCGAAG ACGCGCTTCC TCGCCGCCGC AAGCCACGAC
CTGCTCCAGC CGCTCAACGC CGCGCGGCTG TTCGTCGCCG CGCTCGGCGA CCGGCGGCTG
GCGCTGCCGA CCCGCGCGCT GGTCAGCCAG ACCTCGACCG CGCTCGACTC GGTCGAGGAC
CTGCTCGAGG CGCTGCTCGA GATCAGCCGG CTCGACGCCG GGGCGATCCA GCCCGAGATC
AGCGACTTCC GGCTCGACCG GATGCTGCGC ACCCTGCAGG TCGAATTCGC GCCGCTCGCC
CAGTCGGCCG GGCTGGAGCT GACGATCGAC GCGCAGCCGA TCTGGGTGCG CTCCGACATC
CGATTGCTGC GCCGCGTGTT GCAGAACCTG CTGTCCAACG CGATCCGCTA CACGCCGCAG
GGATCGGTCG CGCTGCGCTG CCGCACCGGC GGCGACGGGG TCGAGATCGA CGTGATCGAT
ACCGGCCCCG GCATCGCCGC CGACAAGCAG CAATTGATCT TCGAGGAATT CCGCCGGCTC
GACACGCGTC CGTCGGGCAA GGGGCTGGGC CTCGCCATCG TCCGCCGCGC CGTCGACATG
CTCGGCCATG CGATCCTGCT GCGGTCGGCG CCGGGGGCGG GGGCCTGCTT CACCGTCGCC
GTCCCGCGCG GCGTCGAGCG CGGCGAATCC GAGGAGGCCG AGGCGGGCGC GGCGCGGGGC
CGGTCGATGA CCGGGCTGCG CATCCTGATC GTCGACAACG AGCGCAGCAT CCAGACCGGG
ATGCGCACCC TGCTCAGCGG CTGGGGCTGC ACGGTGACGA CCGCCGACGG TTTCGCCGAG
GCCGTCGCCG CGATCGACCG CGACGCGCGG CCCGACATCG TCCTGGTCGA CTATCACCTG
AAGGACGGCG AGACCGGCGA CGAGACGATC GCGCGGCTCC AGGCGCATCT CGGCGCGCCG
CTCCCCGCGA TCATGATCTC CGCCGATCGT GGCGAGGAAC TCAAGGCCAG GATGGCCGCC
CAGACGATCC CGCTGCTGAG CAAGCCGGTC AAGCCGGCGC AGCTCAGGGC GCTGTTGCGG
ACGATGCTGG GCTGA
 
Protein sequence
MTAADETELE ALREELRKLR KINAALIDRV ERSTDMAGNA FSMFETAISL EAMVRDRTSQ 
LEDALAKLAQ ANADLARAHG LADAARMRLR DAIDSINEGF VLFDAEDRLV LFNEAYLGFW
PALAGQVREG MSFDEIARLA AERERPGGSL VAPDRWVSDR LARHGIADGG HVQALADGRW
VQINELRTSE GGIVGIYTDI TEAKAEDARE RARELAERNL VLQSTLDNLS EGVCVFDDAG
RLSAWNEALQ RILRLPDGWT QAIADHQGLV DWCRTRLGMR DKGCLDWRGD SAGAGRIERL
CPAGDRSFEV RSTAMERGGQ VIGFTDVTDV QRAQASLRET ADTLERRVSE RTGELVEVNR
RLEAEVAERR SIEAALLDAK TVAEKANLSK TRFLAAASHD LLQPLNAARL FVAALGDRRL
ALPTRALVSQ TSTALDSVED LLEALLEISR LDAGAIQPEI SDFRLDRMLR TLQVEFAPLA
QSAGLELTID AQPIWVRSDI RLLRRVLQNL LSNAIRYTPQ GSVALRCRTG GDGVEIDVID
TGPGIAADKQ QLIFEEFRRL DTRPSGKGLG LAIVRRAVDM LGHAILLRSA PGAGACFTVA
VPRGVERGES EEAEAGAARG RSMTGLRILI VDNERSIQTG MRTLLSGWGC TVTTADGFAE
AVAAIDRDAR PDIVLVDYHL KDGETGDETI ARLQAHLGAP LPAIMISADR GEELKARMAA
QTIPLLSKPV KPAQLRALLR TMLG