Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0699 |
Symbol | |
ID | 5197476 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 764732 |
End bp | 766966 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640580243 |
Product | signal transduction histidine kinase |
Protein accession | YP_001261204 |
Protein GI | 148553622 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.324444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.102548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG CGGACGAGAC CGAGCTGGAG GCGCTGCGCG AGGAATTGCG CAAGCTGCGC AAGATCAACG CCGCGCTGAT CGACCGGGTC GAGCGCTCGA CCGACATGGC CGGCAACGCC TTCTCGATGT TCGAGACCGC GATCTCGCTG GAGGCGATGG TGCGCGACCG CACCTCGCAG CTCGAGGATG CGCTGGCCAA GCTGGCGCAG GCCAATGCCG ATCTCGCCCG CGCCCATGGC CTCGCCGACG CGGCGCGAAT GCGGCTGCGC GACGCGATCG ATTCGATCAA CGAGGGCTTC GTCCTGTTCG ACGCCGAGGA TCGGCTGGTG CTGTTCAACG AGGCCTATCT CGGCTTCTGG CCGGCGCTGG CCGGGCAGGT GCGCGAGGGG ATGAGCTTCG ACGAGATCGC CCGCCTCGCC GCCGAGCGGG AGCGGCCGGG CGGATCGCTG GTCGCGCCCG ACCGCTGGGT GTCGGACCGG CTGGCGCGGC ACGGCATCGC CGATGGCGGC CATGTCCAGG CGCTGGCCGA CGGCCGCTGG GTCCAGATCA ACGAGCTGCG CACCAGCGAG GGCGGCATCG TCGGCATCTA CACCGACATC ACCGAGGCCA AGGCCGAGGA CGCCCGCGAA CGCGCGCGCG AGCTGGCCGA GCGCAACCTG GTGCTGCAAT CGACGCTCGA CAATCTCTCC GAGGGCGTCT GCGTGTTCGA CGATGCCGGC CGGCTCAGCG CGTGGAACGA GGCGCTGCAA CGCATCCTGC GCCTGCCCGA CGGCTGGACG CAGGCGATCG CCGATCATCA GGGGCTGGTC GACTGGTGTC GGACCCGGCT CGGCATGCGC GACAAGGGCT GCCTCGACTG GCGCGGGGAC AGCGCCGGGG CTGGGCGCAT CGAACGGCTC TGCCCGGCCG GCGACCGCAG CTTCGAGGTG CGCAGCACGG CGATGGAGCG CGGCGGGCAG GTGATCGGCT TCACCGACGT CACCGATGTC CAGCGCGCCC AGGCCAGCCT GCGCGAGACC GCCGACACGC TCGAACGCCG CGTGTCGGAA CGGACCGGCG AGCTGGTCGA GGTCAACCGC CGGCTGGAGG CCGAGGTCGC CGAGCGCCGT TCGATCGAGG CCGCGCTGCT CGACGCCAAG ACCGTGGCCG AGAAGGCCAA CCTGTCGAAG ACGCGCTTCC TCGCCGCCGC AAGCCACGAC CTGCTCCAGC CGCTCAACGC CGCGCGGCTG TTCGTCGCCG CGCTCGGCGA CCGGCGGCTG GCGCTGCCGA CCCGCGCGCT GGTCAGCCAG ACCTCGACCG CGCTCGACTC GGTCGAGGAC CTGCTCGAGG CGCTGCTCGA GATCAGCCGG CTCGACGCCG GGGCGATCCA GCCCGAGATC AGCGACTTCC GGCTCGACCG GATGCTGCGC ACCCTGCAGG TCGAATTCGC GCCGCTCGCC CAGTCGGCCG GGCTGGAGCT GACGATCGAC GCGCAGCCGA TCTGGGTGCG CTCCGACATC CGATTGCTGC GCCGCGTGTT GCAGAACCTG CTGTCCAACG CGATCCGCTA CACGCCGCAG GGATCGGTCG CGCTGCGCTG CCGCACCGGC GGCGACGGGG TCGAGATCGA CGTGATCGAT ACCGGCCCCG GCATCGCCGC CGACAAGCAG CAATTGATCT TCGAGGAATT CCGCCGGCTC GACACGCGTC CGTCGGGCAA GGGGCTGGGC CTCGCCATCG TCCGCCGCGC CGTCGACATG CTCGGCCATG CGATCCTGCT GCGGTCGGCG CCGGGGGCGG GGGCCTGCTT CACCGTCGCC GTCCCGCGCG GCGTCGAGCG CGGCGAATCC GAGGAGGCCG AGGCGGGCGC GGCGCGGGGC CGGTCGATGA CCGGGCTGCG CATCCTGATC GTCGACAACG AGCGCAGCAT CCAGACCGGG ATGCGCACCC TGCTCAGCGG CTGGGGCTGC ACGGTGACGA CCGCCGACGG TTTCGCCGAG GCCGTCGCCG CGATCGACCG CGACGCGCGG CCCGACATCG TCCTGGTCGA CTATCACCTG AAGGACGGCG AGACCGGCGA CGAGACGATC GCGCGGCTCC AGGCGCATCT CGGCGCGCCG CTCCCCGCGA TCATGATCTC CGCCGATCGT GGCGAGGAAC TCAAGGCCAG GATGGCCGCC CAGACGATCC CGCTGCTGAG CAAGCCGGTC AAGCCGGCGC AGCTCAGGGC GCTGTTGCGG ACGATGCTGG GCTGA
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Protein sequence | MTAADETELE ALREELRKLR KINAALIDRV ERSTDMAGNA FSMFETAISL EAMVRDRTSQ LEDALAKLAQ ANADLARAHG LADAARMRLR DAIDSINEGF VLFDAEDRLV LFNEAYLGFW PALAGQVREG MSFDEIARLA AERERPGGSL VAPDRWVSDR LARHGIADGG HVQALADGRW VQINELRTSE GGIVGIYTDI TEAKAEDARE RARELAERNL VLQSTLDNLS EGVCVFDDAG RLSAWNEALQ RILRLPDGWT QAIADHQGLV DWCRTRLGMR DKGCLDWRGD SAGAGRIERL CPAGDRSFEV RSTAMERGGQ VIGFTDVTDV QRAQASLRET ADTLERRVSE RTGELVEVNR RLEAEVAERR SIEAALLDAK TVAEKANLSK TRFLAAASHD LLQPLNAARL FVAALGDRRL ALPTRALVSQ TSTALDSVED LLEALLEISR LDAGAIQPEI SDFRLDRMLR TLQVEFAPLA QSAGLELTID AQPIWVRSDI RLLRRVLQNL LSNAIRYTPQ GSVALRCRTG GDGVEIDVID TGPGIAADKQ QLIFEEFRRL DTRPSGKGLG LAIVRRAVDM LGHAILLRSA PGAGACFTVA VPRGVERGES EEAEAGAARG RSMTGLRILI VDNERSIQTG MRTLLSGWGC TVTTADGFAE AVAAIDRDAR PDIVLVDYHL KDGETGDETI ARLQAHLGAP LPAIMISADR GEELKARMAA QTIPLLSKPV KPAQLRALLR TMLG
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