Gene Swit_0698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0698 
Symbol 
ID5197475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp763790 
End bp764710 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID640580242 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_001261203 
Protein GI148553621 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.456776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0702791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA GGTTTCCAGC AGCAGCCCTG CTCGTCCTTG CCCTGCCGCC GGCGGCGCAG 
GCGCAACCGG CGCATGTTTC TCCGGCCTCT CCCCTGGCGG CGCCCGCGCC TCACCAGCGG
CTCCTGCCTC TCGAAGGCGG ACGGAATTTC CGCGACCTCG GCGGCTACCG CGCGCAGGAC
GGCCGGCACG TGAAATGGGG GCTGCTGTTC CGGTCGGGCG CGATGCACGG GCTCACCGCC
GCCGACTATG CCTATCTCGA GAAGCGCGGC ATCCGCGTGG TCTGCGACTT TCGCGACAGC
CGGGAACGCG CCGCCCAGCC GGTGAACTGG CCCTCCGGGG CGGCGCCGCG CCTGCTCTTC
GACGATTACC GTCTCGACAT GGCCGGCATG ATGCCGAAGG GGCCGCCCAG CGGCTGGACC
GAAGCCGATG CGCGCGCCGC CTTCACGGCC AGCTATCCGC GCATGCTCGG CCAGTTCAAC
GGACAATATC GCCGGATGTT CGCCGAGCTG CTTGCCGGTC ACGCCCCGCT CGCCTTCAAT
TGCAGCGCCG GCAAGGACCG CACCGGCATC GCCGCCGCGC TGATCCTGAC GGCGCTCGGC
GTGCCGCGCC AGACGGTGAT CGACGACTAT ATGCTCACCA ACGATTACCT CGATGCCGCC
AAGATGCTGG CCCATGGCCC GGCGCCGGCG AACATGGGAC CGGGGCGCCC CGAAAAGGAG
GCCGGGGGCG ATCCGGCCGC GGCGCTCAAG GGGCTGCCCC CCGGCGTGGT CCGGGCGTTT
CTGGCCGCCG ATCCGGCCTA TATCGAGGCG GCGCTCGCCG TGCTCGACCG TCACAGCGGC
GGCCCGGAAG GATATCTGCG CGACGAATTG GGCTTGAAGC GCGCCGACAT CCTTCGCCTT
CGGACGCTCT ATCTCGAATG A
 
Protein sequence
MRLRFPAAAL LVLALPPAAQ AQPAHVSPAS PLAAPAPHQR LLPLEGGRNF RDLGGYRAQD 
GRHVKWGLLF RSGAMHGLTA ADYAYLEKRG IRVVCDFRDS RERAAQPVNW PSGAAPRLLF
DDYRLDMAGM MPKGPPSGWT EADARAAFTA SYPRMLGQFN GQYRRMFAEL LAGHAPLAFN
CSAGKDRTGI AAALILTALG VPRQTVIDDY MLTNDYLDAA KMLAHGPAPA NMGPGRPEKE
AGGDPAAALK GLPPGVVRAF LAADPAYIEA ALAVLDRHSG GPEGYLRDEL GLKRADILRL
RTLYLE