Gene Swit_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0696 
Symbol 
ID5197473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp761964 
End bp762866 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID640580240 
Producthypothetical protein 
Protein accessionYP_001261201 
Protein GI148553619 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2152] Predicted glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.946227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0673528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCCT ATGTCGTCGA GCAATTGCAG GAGGTGACGC TCGACATCGC GGGCGCCGAC 
GGCCGGCTCG CGCATTACGA CCTGATGAGC CCGTTCGTCT GGACCGAAGG CGAGACCTAT
CGCCTGCTCG TCCGCGTGGT GCCGAACCCG CTGGGCCCGA CCGATCCCAC GGGCATCATC
TGGGGCGGGG ATTCAGACGA TGGACGCTAT TTCCGGATGC GCGACGCGCC GGCGATCGTG
CCCGGCCCCA ATCCCGACGA TGCCGGGGGA TGCGAGGACC CGACCGTCGT GCGGGGCGAG
GACGGCGCCT ATCTCGTCTT CTATACCGGC GTGGACGCCG CGCGCTCGCA GGGCGCCCTG
CTGGTGGCAA AGGGGCCGAA GCTCACCGAA CTGCACGAAC AGCGCGTGCT GCTCAGGGCG
CCGGAAGGCG AGGGCAACAT CAAGGAGGCC AGCCTGGCGC TGGGCTCGGA CGGCCGGTTC
CGGCTCTTCT ACGAATATGC CAGGAACGAC GCCTCGCGGA TCGGGATGGC GGTGGGCCCG
ACGGCGGAGG GGCCGTGGAC GGTAGTCGAC GATCCCTTTT CGATCCGCGA GGACGGCTGG
GACAATTGGC ACCTGTCGAC CGGCCCGATC GTCCAGCAGG AGGGGCGCGA CCCGGTCATG
TTCTATAACG GCGCGACGGT CGACGCGCGG TGGCGCATCG GCTGGATCAG CTTCGCGCCG
GATTTCAGCC GGGTGACCGG GCGGGGGCTG GAGCCCGTCA TCATGCCGCC GCCGGCCAAG
AGCCGGGACG CCACCGACAT CGCCTTCGCG GCCTCGTGCC TGGTGATGGG CGAGGACATC
TGGCTCTATT ATTCGCTGGA GGACAAGATC CTGCGGCGCG CGCTGGTGCG TCTTTACGCC
TGA
 
Protein sequence
MVAYVVEQLQ EVTLDIAGAD GRLAHYDLMS PFVWTEGETY RLLVRVVPNP LGPTDPTGII 
WGGDSDDGRY FRMRDAPAIV PGPNPDDAGG CEDPTVVRGE DGAYLVFYTG VDAARSQGAL
LVAKGPKLTE LHEQRVLLRA PEGEGNIKEA SLALGSDGRF RLFYEYARND ASRIGMAVGP
TAEGPWTVVD DPFSIREDGW DNWHLSTGPI VQQEGRDPVM FYNGATVDAR WRIGWISFAP
DFSRVTGRGL EPVIMPPPAK SRDATDIAFA ASCLVMGEDI WLYYSLEDKI LRRALVRLYA