| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0693 |
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| Symbol | |
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| ID | 5197844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 758813 |
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| End bp | 760552 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580237 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001261198 |
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| Protein GI | 148553616 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.804984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.410128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGAT CCATGCTGCG CACGCTGGCC GGGGCGGCCG CGCTCGCGCT GGTGGCGGCG
ACGGCGCCGA CGCAGGCGAA CGGCCCCACC GACGCCGATC TGATGAACGA CGCCGCCTCG
ACCGGCGACG TGCTGACCTA TGGCATGGGC CCGCGCGCGC AGCGCTTCAG CCCGCTCAAG
GCGATCAGCA CCGACAATGT CGCCAAGCTG GTCCCCGCCT TCTCCGCCTC GCTCGGCGGC
GAGAAGCAGC GCGGCCAGGA GGCGCAGCCG ATCGTCTATG ACGGCACCAT CTACGTCACC
GGCAGCTATT CGCGCGTCTT CGCCTTCGAT GCCCGCACCG GCGAGGAGAA GTGGCAATAT
GACGCCCGCC TGCCCGAAGG GATCATGCCC TGCTGCGACG TGGTGAACCG CGGCGCCGCC
ATCTATGGCG ACAAGATCAT CTTCGCGACG CTCGACGCGC ATCTCGTCGC GCTCAACCGC
GAGACCGGCA AGGTCGTCTG GAACAAGAAG GTCGCCGACT ACCAGGCCGG CTACAGCGCC
ACCGCCGCGC CGATCATCGT CAAGGGCAAG GTGATCTACG GCAATTCGGG CGGCGAGTTC
GGCATCGTCG GCGCGGTCGA GGCGCGCGAC GTCGAGACCG GCGAGCTGGT CTGGCGCCGT
CCGACGATCG AAGGCCATAT GGGCTCGCTG GGCGGCAAGG ACAACGGCAT CACCGGCAAG
CTCAACGCGA GCTGGCAGGG CGACCTGTGG AAGACCGGCG GCGGCGCGAC CTGGCTCGGC
GGCACCTATG ATCCCGAGAC CAACCTGCTC TATTTCGGCA CCGGCAATCC GGCGCCGTGG
AACAGCCACC TGCGCCCCGG CGACAATCTC TACACCTCGT CGACGCTCGC CATCGATCCC
GACACCGGCG TGATCAAATG GCATTTCCAG ACCACGCCGC ACGACGGCTG GGACTTCGAC
GGCGTCAACG AGTTCATCCC GTTCGACGCG ACGATCAACG GCAAGCCGAT GAAGCTGGGC
GCGAAGGCCG ACCGCAACGG CTATTTCTTC GTGCTGGACC GCACCAACGG CAAGTTCATC
GGCGCGCACA AATTCGTGAT GCAGACGACC TGGGCCAACG GCTTCAACGC CAAGGGCCGT
CCCAATTATG TCGACGCCAA CCGCCCCGGC GCGCCGACCG CCGAGAAGGG CACCAGCGTC
TTCGCCTCGC CCAGCTTCCT CGGCGGCAAG AACTGGATGC CGATGGCGTA CAGCCAGGAC
ACCGGCCTGT TCTACATCCC GTCGAACGAC TGGGGCATGG ACATCTGGAA CGAGCCGATC
GCCTACAAGA AGGGCGCCGC CTATCTGGGC GCGGGCTTCA CGATCAAGCC GATCGCCGAG
GACCATATCG GCGCGCTGCG CGCGATGGAC CCGAAGACCG GCAAGATCGT GTGGGAGTAC
AAGAACAAGG CGCCGCTGTG GGGCGGTGTC CTGACCACCG CAGGCAACCT CGTCTTCACC
GGCACGCCCG AGGGCTATCT GAAGGCGTTC GACGCGAAGA CCGGACAGGA GCTGTGGAAG
TTCCAGACCG GATCGGGCGT CGTCGGGTCG CCGGTCACCT GGGAACAGGA CGGCGAGCAA
TATGTCGCGG TGATGTCGGG CTGGGGCGGC GCGGTGCCGC TGTGGGGCGG CGAGGTCGCC
AAGTCCTTCA AGGACATCAA CCAGGGCGGC TCGCTCTGGG TGTTCAAGCT CGCGAAGTGA
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| Protein sequence | MKGSMLRTLA GAAALALVAA TAPTQANGPT DADLMNDAAS TGDVLTYGMG PRAQRFSPLK
AISTDNVAKL VPAFSASLGG EKQRGQEAQP IVYDGTIYVT GSYSRVFAFD ARTGEEKWQY
DARLPEGIMP CCDVVNRGAA IYGDKIIFAT LDAHLVALNR ETGKVVWNKK VADYQAGYSA
TAAPIIVKGK VIYGNSGGEF GIVGAVEARD VETGELVWRR PTIEGHMGSL GGKDNGITGK
LNASWQGDLW KTGGGATWLG GTYDPETNLL YFGTGNPAPW NSHLRPGDNL YTSSTLAIDP
DTGVIKWHFQ TTPHDGWDFD GVNEFIPFDA TINGKPMKLG AKADRNGYFF VLDRTNGKFI
GAHKFVMQTT WANGFNAKGR PNYVDANRPG APTAEKGTSV FASPSFLGGK NWMPMAYSQD
TGLFYIPSND WGMDIWNEPI AYKKGAAYLG AGFTIKPIAE DHIGALRAMD PKTGKIVWEY
KNKAPLWGGV LTTAGNLVFT GTPEGYLKAF DAKTGQELWK FQTGSGVVGS PVTWEQDGEQ
YVAVMSGWGG AVPLWGGEVA KSFKDINQGG SLWVFKLAK
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