| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0687 |
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| Symbol | |
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| ID | 5200986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 750397 |
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| End bp | 752715 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580231 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261192 |
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| Protein GI | 148553610 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.80601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGCA GGCATCGGTT GATGGCAGGC ATCGCCGTCA TTCTGGCGCC TATGCCGGCG
ATGGCGGCGG AGGAGGCCGA GGCCGAGGCG ACGGCCCCCA TCGTTGTCAC CGCGCCCGGC
GGCGCGGTCG ACCTCGACGA CGCGATCCGC CTGACGGGCG AGGATATCGC GCGGGCCGGC
CGGCCCGACC TGCTCGGCGC GCTGACTCGG CAGATCGCGG GGATCAGCCT GCAGGACGCG
CAGAACAACC CCTGGCAGCC CAATCTCGTC TATCGCGGCT TCATCGCTTC GCCCCTGCAA
GGTCAGGCGC AGGGCCTCGC CGTCTATCTC GATGGCGCGC GCTTCAACCA GCCGTTCGGC
GATACCGTCC AGTTCGACCT GATCCCCGAG GCGGCGATCC GGCGGATGTC GGTGCTGGAC
GCGAGCCCGG TCTATGGCCT CAACGCGCTG GGCGGCGCGA TCCTGCTCGA CACCAGGACC
GGCGCGAGCG ATCCGGGACT GGAGGCGAGC GCGACCGGCG GACGCTTCGG CTATGCCGAG
ACGAGCCTGT CGGGCGGCCT GCAGCGCGGC GCGTTCAGCG CCTTCGGTGC CTTCCAGTAC
AGAAGCGAGC ATGGCTGGCG CGACCATAGT CCGTCGCGCC TGTACAATGG CTATGCCGAC
CTCGGCTTCG ATATCGAAGG CGGCGGCATG CACCTGAAGC TGATCGGCGC GGACACCGAC
CTGACCGGCA ACGGCGTCGC CCCGGTCGAG CTGCTCGCCG CCGATCGGCG CGCGGTGTTC
ACCTGGCCCG ACAACAGCCG CAGCCGCTAC GGCCGGATCA GCCTCCACCC CTGGGTCGCG
CTGTCGGATC GGACCCGGCT GGAGGGCACG CTCTACGCGC AGCGGCTGAC CCTGCGCACC
GTCAACGGCG ACGCCGCCGA CATCGAGGGC TGCGAGGACG ACGACGATGC CGGCCTCGTC
TGCCTGGAGA CCGTCGGCGG CGGTGACGAC GATGAGGAGG CGCAGGCGCG GCTGATCGGG
GCCGACGGAC GGCCGGTCGC CGATGTGCTG GGCGGGGAGG GCTATGGCGT GCTCAATCGC
GGGCGGACCC GCACCGACGC GATGGGCGCG CTGTTCCAGA TCATCGACGA GCGGCCGCTG
GGCGCGGGAG ACAATCATTT CGCGCTGGGG CTCAGCTACG ACACCAGCCG CACCCGCTTC
GCCACCGCGA CCGAGCTGGG CGAGCTGACC GACGAACGCA GCGTCGACGG CCTCGGCACG
ATCATCGTCC AGCCCGACGG CGCGATCGCT CCGATCGGGC TGGTCGCCCA TGCCGATTAT
TGGGGCGTCT TCATGCAGGA CCGGCTGCCG ATCCTGCCCG GCCTCTCGGC CGAGATCGGG
CTGCGCTACA ACCATGCGCG CATCCGCCTG GTCGACCGGA TCGGCACCGC GCTCAACGGC
CGCCACAGCT TCGATCGGAT CAATCCGGGG ATCGAGCTCG ATTATCGGGT GGGGCCCGGC
CTTGCGCTGC GCGCCGGCTA TGCCGAGAGC AACCGCGCGC CGACCCCGGC CGAGCTGTCC
TGCGCCGATC CGGCCGCGCC GTGCAGCCTG ACCAACTTCT TCGTCGCCGA TCCGCCGCTC
AGGCAGGTCG TCGCGCGCAC CTGGGAAGCG GGCGCGAGCG GCAGCGGCGA ACTGGGCGGC
GTCCGTCTCG AATGGCTGCT GTCGGGCTAT CGCGCGACCA ATCGCGACGA CATCCAATAT
ATCGCCTCCG CGATCCGCGG CCGCGCCTAT TTCCAGAATG TCGGCAATAC CCGGCGCCAG
GGGATCGAAG CGACGCTGAA GGCGCGGCGC GGCGGGCTGA CCGCGACGCT CGGCTATGCC
TTCACCGACG CGCCCTACCG CACCCCGCTG ACCCTCTCCA GCCCGGCCAA CCCGGCGGCC
GGAGCGGACG GCACGATCGC GGTTCAGCGC GGCGACCGGC TGCCCGGCAT CCCCCGCCAC
AGCGCGACGC TGGCGGTCGA CTATGCCGGG CGCGGCTGGT CGCTGGGCGG CGACATGATC
GTCCGCTCGG GACAATATCT GGTCGGCGAC GAAGGCAACG ACAATCCGCG TCTCGGCGGC
TACGCCGTCT TCAACCTGCG CGGCAGCGTC GACCTGATCC GCGGCGTCAC CCTGTTCGCC
GAGCTGCGCA ATATGTTCGA CCGCAGATAC GCCACTTTCG GCACCTTCAG CGAGGTCGGC
GAGATCGAAC TGGAGGAAGC CCCCGGCGCC TCGAACCCGC GCGCCTACGG GCCGGGCGCG
CCGCGCCGCT GGTATGCGGG GATGCGGGTG CGGTTGTAG
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| Protein sequence | MDGRHRLMAG IAVILAPMPA MAAEEAEAEA TAPIVVTAPG GAVDLDDAIR LTGEDIARAG
RPDLLGALTR QIAGISLQDA QNNPWQPNLV YRGFIASPLQ GQAQGLAVYL DGARFNQPFG
DTVQFDLIPE AAIRRMSVLD ASPVYGLNAL GGAILLDTRT GASDPGLEAS ATGGRFGYAE
TSLSGGLQRG AFSAFGAFQY RSEHGWRDHS PSRLYNGYAD LGFDIEGGGM HLKLIGADTD
LTGNGVAPVE LLAADRRAVF TWPDNSRSRY GRISLHPWVA LSDRTRLEGT LYAQRLTLRT
VNGDAADIEG CEDDDDAGLV CLETVGGGDD DEEAQARLIG ADGRPVADVL GGEGYGVLNR
GRTRTDAMGA LFQIIDERPL GAGDNHFALG LSYDTSRTRF ATATELGELT DERSVDGLGT
IIVQPDGAIA PIGLVAHADY WGVFMQDRLP ILPGLSAEIG LRYNHARIRL VDRIGTALNG
RHSFDRINPG IELDYRVGPG LALRAGYAES NRAPTPAELS CADPAAPCSL TNFFVADPPL
RQVVARTWEA GASGSGELGG VRLEWLLSGY RATNRDDIQY IASAIRGRAY FQNVGNTRRQ
GIEATLKARR GGLTATLGYA FTDAPYRTPL TLSSPANPAA GADGTIAVQR GDRLPGIPRH
SATLAVDYAG RGWSLGGDMI VRSGQYLVGD EGNDNPRLGG YAVFNLRGSV DLIRGVTLFA
ELRNMFDRRY ATFGTFSEVG EIELEEAPGA SNPRAYGPGA PRRWYAGMRV RL
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