Gene Swit_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0684 
Symbol 
ID5196127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp747466 
End bp747939 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content69% 
IMG OID640580228 
Productpseudoazurin 
Protein accessionYP_001261189 
Protein GI148553607 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR02375] pseudoazurin 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.341951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.75215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGAG GCGAACAGAG AGGAGTTCGC ATGGTCCGCT TCGCCCCCGT CTCGATCGCC 
GCGCTCGCCC TGCTGGCCGC GCCGCTGCCG GCGCATGCCA GGGACATCGT CGTCCACATG
AAGAATATGG GCAAGGACGG CGCGATGGTG TTCGAGCCTG CCTTCATCAA GGCGAAGGTC
GGCGACCGGA TCGTCTTCAC GCCCACCGAC CCCAGCCACA ATGCCGAGAC GCTGCCGGCG
ATGCTGCCGG CCGGCGCGAC CCCGATGAAG GGCGCGCTGA ACAAGGAGGT GGCGATGACG
GTGAGCGCGC CCGGCCTCTA CGGCATCAAG TGCATGCCGC ATTATTCGAT GGGCATGGTC
GCGCTGGTCC AGGTCGGCCA GCCGGCGGCG GCCGACCTCG TGGCGGCGAA GGCGGTCAAG
CTGCCGCCGC TGGCCGCCAA GCGGATGACG GCGCTGCTCG CCAGGGTCCG CTGA
 
Protein sequence
MTRGEQRGVR MVRFAPVSIA ALALLAAPLP AHARDIVVHM KNMGKDGAMV FEPAFIKAKV 
GDRIVFTPTD PSHNAETLPA MLPAGATPMK GALNKEVAMT VSAPGLYGIK CMPHYSMGMV
ALVQVGQPAA ADLVAAKAVK LPPLAAKRMT ALLARVR