Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0673 |
Symbol | |
ID | 5196247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 731766 |
End bp | 734051 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640580217 |
Product | TonB-dependent receptor |
Protein accession | YP_001261178 |
Protein GI | 148553596 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGG GACAAGGGGG ATACGGGGCG GCTCGACGGG CGCAGGCCGG CTATCGGGCG ATCGCCATCG CCACGCTCGG CATGGCGGCT GGCCTGTCGG CGGCGCCGGT CGCGGCACAG AGCAGCGGTG ACGATGCGCA GTTGTCCGAG ATCGTGGTGA CCGCCGAGCG CCGCGAAACG CGGCTGCAGG CGACGCCGAT CGCGGTGACC GCATTGTCCG GGGCGGCGAT GGCCGAGCGC GGCGCGACCA CGGTCAGCGA CCTGGCCGGC ACCATCCCCA ACTTCACGGG TCAGGCCAGT CCCGCAGGTG GCGATTCCAG CGGCCAATAT TTCATCCGCG GCGTCGGGCA GTTCGACTTC ATCGTTACGC AGGAGCCCAG CGTGGGTCTC TATCTCGATG GCGTCTATGT CGGTCGCACA GCGGGCGCCG CGCTCGATCT GGTCAATATC GAACGGGTCG AGGTGCTTCG CGGGCCGCAG GGAACGCTGT TCGGCCGGAA CACCACCGGC GGCGCGATCC AGGTGGTGAC GCAAAAGCCC GCCCGTGAAT TCGGTGGCTC GGCGGAGGTC ACCTTCGGCA GCCGCAAGCG GCTCGACATC CGCGCCAGCA TCAATGCACC GCTGATCGAG GACCGGCTGT TCGCCAATGT CGCGGTCGCT TCCTTCGATC AGGAAGGATA TGGCCGCCGG CTCACCACCG GCGAGAAGGT CGGCGAGCGC GACAATATCG CCGGTCGCGC GCAGCTCTTC TACGACGGCG ACGATGTCGA CATCCGTTTC GCGGTCGATG GTTCGAAGCG CGATGTCGGG CCGGGCCAGG AATCGCTGAT CCTGGTCGAT CTCGCCAATC CCGCGTCGGC GGGTGTGGTC GCCTATAACG CGTCGTTGCA GGCGATGGGC TTTGCCCCGA TCGGCACGAA CTTCATCCCG AAGGATCCGC TCGACACTTA TTCGGCCTAT CCGGCCAAGG ACAATTACGA GATCTATGGC GGCAATCTGA CGGTCGACTG GTCGATCGGC CCCGATCTCT CGCTCAAGTC GATCAGCGCC TATCGCAACC TGAAGGCTCA GGCGTCGCGC GACTTCGACA GCACGCCTTA TCCGCTGATT CAACAGGCGA TCGACGACGA TCAGTCGCAG ATCAGCCAGG AGCTGCAATT GGCCGGCAAG GCGTTCGACC AGCGGCTGCA ATATGTCGCC GGCCTCTTCT ATTATCGCGA GCGTGCAAGG CAGTCGCAGT TCGCCGATCT GTTCGTGCCG ATCGTGCGGA CGGGGCCGGG CGCCTATGAT TTCGCGCCAA CTGCCGGCGG CACGGCGCTG CGCGTCTTCA ACAACCAGAC CACCAAGAGC TATGCCGCCT TCGCCCAGCT CGATTATCGG CTGACCGACA GCTTCTCGCT CACGGCGGGC CTACGCTACA GCCGCGACGA AAAGGACCTG ATCAGCTCGT TCGGGGTCGG CGTGTTCGGC AATGTGCGAC CACCCGCGAA GGTGACGGAC AGCTGGTCGA ACCTCTCCCC GAAGGTCGGC GTGCAATATA AGCCGAACGA CGACGTCATG CTGTACGCGT CGCTCTCGCG CGGCTTCCGC AGCGGTGGTT TCAACGGCCG TTCGTTCGTC CCCGCGCCGC CGACCAGCTT CGGCAACGAG ACGATCTGGG CCTATGAGGC CGGCCTGAAG TCCGAATGGC TGGATCGTCG CCTGCGCTTC AACATCGCCG GCTTCTATTA CGACTATAAG GATTATCAGG GATCGACCCT CGACAATCTC GCGGTCGTGG TCGGCAACAT CGCCAATGTC GCGCTGTCGG GGTTCGAGAT CGAGAGCGCC GCGCTGCTCT TCCCCGGTTT CCGGCTCGAA GCCAATCTTG GCTATCTCCA CCAGAACATC AAAAAGGTCG ATCCCAATGC GGCGGTGTCG ATCGCACCCT TTACCAAATT GGTGAACTCG CCGAAATGGT CGGGCTCGCT GGGCGCGCAA TATGAGGCCG ATCTGGGCGG CAAGGGCACG CTCACCGTGC GCGGCGATGC CAGTTATCGC AGCACCATCT GGTTCTTCCT GCCGAATAGC CCGGGTGAGA ACCAGAAGAG CTATTGGCTC TACAATGGCC GGATCGGCTA TCGCGAGCCG GGCGATAAAT GGGAAATCCA GTTCTACGGG CTCAACCTGG CCAACAAGCG CTACAAGGTG TTCGCCGAGA ACGAGGTCGG TTTCGGCACC GCCGTCACCT TTGCCCAATA TGGCCGCCCG CGCGAGTTCG GCCTGACCGT GAAGGCGCGC CTCTGA
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Protein sequence | MMRGQGGYGA ARRAQAGYRA IAIATLGMAA GLSAAPVAAQ SSGDDAQLSE IVVTAERRET RLQATPIAVT ALSGAAMAER GATTVSDLAG TIPNFTGQAS PAGGDSSGQY FIRGVGQFDF IVTQEPSVGL YLDGVYVGRT AGAALDLVNI ERVEVLRGPQ GTLFGRNTTG GAIQVVTQKP AREFGGSAEV TFGSRKRLDI RASINAPLIE DRLFANVAVA SFDQEGYGRR LTTGEKVGER DNIAGRAQLF YDGDDVDIRF AVDGSKRDVG PGQESLILVD LANPASAGVV AYNASLQAMG FAPIGTNFIP KDPLDTYSAY PAKDNYEIYG GNLTVDWSIG PDLSLKSISA YRNLKAQASR DFDSTPYPLI QQAIDDDQSQ ISQELQLAGK AFDQRLQYVA GLFYYRERAR QSQFADLFVP IVRTGPGAYD FAPTAGGTAL RVFNNQTTKS YAAFAQLDYR LTDSFSLTAG LRYSRDEKDL ISSFGVGVFG NVRPPAKVTD SWSNLSPKVG VQYKPNDDVM LYASLSRGFR SGGFNGRSFV PAPPTSFGNE TIWAYEAGLK SEWLDRRLRF NIAGFYYDYK DYQGSTLDNL AVVVGNIANV ALSGFEIESA ALLFPGFRLE ANLGYLHQNI KKVDPNAAVS IAPFTKLVNS PKWSGSLGAQ YEADLGGKGT LTVRGDASYR STIWFFLPNS PGENQKSYWL YNGRIGYREP GDKWEIQFYG LNLANKRYKV FAENEVGFGT AVTFAQYGRP REFGLTVKAR L
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