| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0670 |
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| Symbol | |
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| ID | 5196244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 727468 |
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| End bp | 730140 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580214 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001261175 |
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| Protein GI | 148553593 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGATC TGGCTGCCGC CAGCAGCTTC CTGCGGTCGC GCCTGCGCCC GCGGCCGCAG
CTCGTGCCGC TGGTCGAACG CGATCGCCTG CTGGCCTGGC TCGATGCCGA CGTCCCATCC
CGCCTCGTCT GGATCGGCGC TCCGCCGGGT GCCGGCAAGA CGACGATGAT GGAGCAGGCC
TATGCACGGG TCGGATCGTG CGGCGGCTTT CGGGCGTGGC TTAGCCTCAC CGATCAGGAG
GCGACGACCG CGGCTTTCTC CGCGGCGCTG ATCCATGCCG TGGCGCTGTC GGCGCGGGAC
GAGCCCGCCG AGCCGGGCAG GGACCTGCCC GAGGCGTTCT CGCAGCTGTG CGGCGGGCGG
CATATCTGGC TGTTCCTGGA CGATTGGGAT CGCGCGGAGT GCGCCGAGAC CGAAGCTGTC
CTCCGCTTGA TCCTCGCCGA ATATCCGGGC GGCATCACCG TGGTGGTCGG CTCGCGCACC
GCATCGCCGC TGACCAGCGC CGCGCTGCTG ATGCGGGGTG GGATCATCAG GTTCGACTTC
GACAATCTCT GCTTCACCCG AGGCGAGATT GCGGGTTGCG CCGGAGCGGA CCCATCCGCC
GGCGATCTCG ACGCGATTTG GACGGAGACC CATGGCTGGC CGGCGCTGGT CCAACTCGCC
CGGCTGGGCA TGATGCAGCG GCGCAGCTTC GGCGGATCGG GCGACGATGC CTTCCCCGAT
GCGATGATCG CGGACTATGT CTCGGAGGAG ATATTGGGCG CGCTCGTATC GCCGGAGCGC
CAGGCGATGA TCTGCGGCGC CCTGTTCGAC GAGCTGTCCG CCGATCTTCT GGACATCATC
CTCGAGCGAT CGGACAGCAT GGAGTCGATC GATGCGCTGC GCCGCCGCCA CCTGATCGCC
GAAGCCGGCA GCTCGGCCAA TTGGTACCGG ATGATGCCGG TCCTCGCGGC GCATGTCCGC
CGACGGCGTT TCGCGCCGAG CCGGGCGATC CCGGTTCGCC AGATCGAAGC GGTCTGCGAT
TTCCTCGTCC GCTTCGGGCG GCATGACGAT GCGGTCCGTT TCGTCCTGCG GGCCGGCGCC
CCCGAGATGG CGGCGGCGCT GTTCGAGCGT GGCGCGGGCT ATCTGCTGAC GATGCGCTGG
GGCTTCGAGA CGATCCGCCT GTTTCGCGAA TTCGATATTC CCGGGATCGA GCGTTTCCCC
CAGCTCGCTC TCGCGCTGAT CTATCTCGAT CTACAGGAGG AGCGCGTCGC CCGCGCTCGG
GCCGCCTTCG AACGGCTGCG CGGCGAGGAT GCGGCGCTCG CCAGGGTCGA CGACGCGAAC
CTGCGGCTTG CCTTCTCGGT GGTGGAGGGG CTGCTGTGTC TCGTCGAGGA TAGGGAGATG
CCGGTCCGGG TGACCGCGGC GATGGAAACG GCGCTCGATG AGAACAGTAT CGGACCGGTA
GCCCTGCGGT CGGCGTTGTG CGTCCTGGTT TCGCACTATC TCGATACCGG GGACTATGCC
GAGGGGCTTT TGCGGGCGTC GGTGGCGTTG CTGTCGGCCG GCGCGGACGC GCCTTATGTA
TCCGACTATC TCGATCTGTG CTTGAGCCTG GCCAATGGCG CGCTGGGCAA TATGGCGGAG
GCGGAAGCAC ATGCCCGCTC GGTCGAACGG CGCAACGCGG TGGGCCGGGG CTTCCCCGAG
GAGGCGATGG TCACCGCCTA TGCCTCCTTC CTGCTCGCCC AGATCCGCTA CGAGACGGGC
GATATCGAAG GCGCGTGGGA GATCAGCCGT GACAGCGCGC CGGCATTGCC CGAGCGGCAT
GGCTGGCTGC CCGCCTATGA AGCGGCGACG CCGACCGTCG CCTCGCTGCT CCGCCGCAAG
GAAGGGATCG AGCCGGCGCT GCATTTCCTG CACGATCAAC AGGGCGCGGC CCGGCGTAAC
GGTTTCGATC GGCTGGAGCT GGTCGCCACG GCCAGCGAGA TGCACCAGCT TGCCCTGGCC
GGACGGATCG AGGAAGCGCG CAAGATCGCC GAACAGCCGA CGGTGCGCCG GATATTGTCG
GGCGCCGAGA TCGACTCGCG CGCCTCTCGC CTTGCGCCGG GCTTGTTCGC GGGCGCGATC
AGGCTGGCCC TGTGCGGCGG CGATCTCGCC AGGGCGAAGC AGATGCTGGG GACCCTGAAG
TCCTTCGATC GGCACGGTGC GAACGAGCGC CTGCAAATTC CGCTGATGAC GCTCGAGGCT
AGCCTGATGC ACCTGTCGGG AGCGGCGGAG CCCTGTGTGG CGATATGCGG GGATATCGGC
CGACGGCTCA CCCGTTCCGG CCGATGGACC TATCTGGCGG ACGAGCCGCG TGCCCTGGTC
ACGCCATTGC TGGCCCAGAT CCTGCCCAAG CTCGACGCGG TAGCTTCAGG CCAGACCGCC
TTCGTCGTCC AGTTGCTCGA AGGTCAGTGC AAGGGCGTTG CGAGGAAGAT CAGCCATGGC
GGCCCCCATC TGAGCCCGCG CGAGCGTGAG GTGTTGGAGA TGCTGGCCGA CGGCTATTCG
GCCAAGGAGA TGGCGAACCA GCTCGGCCTG ATGGAAAGCA CCCTCAAGGG ATACCGCAAG
GCGCTCTTCT CGAAGCTCAA CGCGCATACA CGGTCGCGCG CATTGCGCGC TGCGCGTGAG
CTCAACCTGA TCGAGACCCG CTCTTCGCTG TAG
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| Protein sequence | MTDLAAASSF LRSRLRPRPQ LVPLVERDRL LAWLDADVPS RLVWIGAPPG AGKTTMMEQA
YARVGSCGGF RAWLSLTDQE ATTAAFSAAL IHAVALSARD EPAEPGRDLP EAFSQLCGGR
HIWLFLDDWD RAECAETEAV LRLILAEYPG GITVVVGSRT ASPLTSAALL MRGGIIRFDF
DNLCFTRGEI AGCAGADPSA GDLDAIWTET HGWPALVQLA RLGMMQRRSF GGSGDDAFPD
AMIADYVSEE ILGALVSPER QAMICGALFD ELSADLLDII LERSDSMESI DALRRRHLIA
EAGSSANWYR MMPVLAAHVR RRRFAPSRAI PVRQIEAVCD FLVRFGRHDD AVRFVLRAGA
PEMAAALFER GAGYLLTMRW GFETIRLFRE FDIPGIERFP QLALALIYLD LQEERVARAR
AAFERLRGED AALARVDDAN LRLAFSVVEG LLCLVEDREM PVRVTAAMET ALDENSIGPV
ALRSALCVLV SHYLDTGDYA EGLLRASVAL LSAGADAPYV SDYLDLCLSL ANGALGNMAE
AEAHARSVER RNAVGRGFPE EAMVTAYASF LLAQIRYETG DIEGAWEISR DSAPALPERH
GWLPAYEAAT PTVASLLRRK EGIEPALHFL HDQQGAARRN GFDRLELVAT ASEMHQLALA
GRIEEARKIA EQPTVRRILS GAEIDSRASR LAPGLFAGAI RLALCGGDLA RAKQMLGTLK
SFDRHGANER LQIPLMTLEA SLMHLSGAAE PCVAICGDIG RRLTRSGRWT YLADEPRALV
TPLLAQILPK LDAVASGQTA FVVQLLEGQC KGVARKISHG GPHLSPRERE VLEMLADGYS
AKEMANQLGL MESTLKGYRK ALFSKLNAHT RSRALRAARE LNLIETRSSL
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