| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0659 |
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| Symbol | |
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| ID | 5196653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 716073 |
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| End bp | 717530 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580203 |
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| Product | putative oxidoreductase |
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| Protein accession | YP_001261165 |
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| Protein GI | 148553583 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.247758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAACG AGCCGATGCT GAAATTCGTG GGCGTGGGAC AGGCGTTCCC GCCCAAGCGC
GAGGCCGATG CGCGCATCGC CGATTTCGGC GAGATCGCGG CGCGCTATTC GGACGACAAG
GCTGGCGAGC AGGCGTCGCG CTGCTCGCAG TGCGGCGTGC CCTATTGCTC GACGCATTGC
CCGCTCCACA ACCATATCCC CGACTGGCTG CGCCTGACCA CCGAGGGGCG GCTGCGCGAG
GCCTATGAGC TGTCGAACGC GACCTCGACC ATGCCCGAGA TCTGCGGCCG CATCTGCCCG
CAGGACCGGC TGTGCGAGGG CAATTGCGTG ATCGAATTCT CGGGGCACGG CGCGGTGACG
ATCGGCTCGG TCGAGAAGTA CATCACCGAC ACCGCCTGGG AGCGCGGCTG GGTCGAGCCG
GTGCAGGTCG GCCCGGCAAG GGGCCAGTCG GTCGGCGTGA TCGGCGCGGG CCCGGCGGGC
CTCACCGTCG CCGAGCTGAT GCGCGCGCGC GGCTATGACG TCCATGTCTA TGACCGGCAC
GACCGCGCCG GCGGCCTGCT GACCTACGGC ATCCCCGGCT TCAAGCTGGA GAAGCCGGTC
GTCCAGCGCC GGGTGCAGCG GCTGATCGAC GCCGGCATCG TCTTCCACCA GGATTTCGAG
GTCGGCCGCG ACGCCACGCT CGACGAGCTG CGCGACCGCC ACGACGCGAT CCTGATCGCG
ACCGGCGTCT ACAAGCCGCG CGCGATCAAG GCGCCCGGCG TCGGCGCGCC CGGCATCGTC
GAGGCGCTCG ACTATCTCAC CGCGTCGAAC CGCAAGGGGT TCGGCGATGC GGTGCCGGCG
TTCGACGAGG GGCCGCTCGA TGCGAAGGGC AAGAATGTCG TCGTGATCGG CGGCGGCGAC
ACGGCGATGG ACTGCGTCCG CACCGCGATC CGCCAGGGCG CCGCCTCGGT GAAGTGCCTT
TATCGCCGCG ACCGGGCGAA CATGCCGGGC TCGCAGCGCG AGACGAAGAA TGCCGAGGAG
GAGGGCGTCG AGTTCGTCTG GCTGTCCGCG CCCGAGGCGT TCGACGGCGG CGAGACGGTC
GGCGGCGTGC GCGCGATCCG GATGCGGCTC GGCGAGCCCG ACATGTCGGG CCGCCGCACC
CCCGAGCCCG ATCCGGGCAG CGAATTCCGG ATCGAGGCCG ATCTGGTGAT CAAGGCGCTC
GGCTTCGATC CCGAGGATCT GCCGGGCATG TTCGGCGCGC CCGAGCTGTC GGTGACCCGC
TGGGGCACGC TCAGGGTCGA CCACAAGACG ATGCAGACCT CGCTCGAAGG CGTGTTCGCG
GCGGGCGACA TCGTCCGCGG CGCCAGCCTG GTGGTCTGGG CGATCCGCGA CGGCCGCGAC
GTCGCCGTGC GGATGCACGC CTATCTGAAG GCTAAGGCGG AGCGGGTCGA GCTGGCGGCC
GGGAAGGTGG CGGCATGA
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| Protein sequence | MANEPMLKFV GVGQAFPPKR EADARIADFG EIAARYSDDK AGEQASRCSQ CGVPYCSTHC
PLHNHIPDWL RLTTEGRLRE AYELSNATST MPEICGRICP QDRLCEGNCV IEFSGHGAVT
IGSVEKYITD TAWERGWVEP VQVGPARGQS VGVIGAGPAG LTVAELMRAR GYDVHVYDRH
DRAGGLLTYG IPGFKLEKPV VQRRVQRLID AGIVFHQDFE VGRDATLDEL RDRHDAILIA
TGVYKPRAIK APGVGAPGIV EALDYLTASN RKGFGDAVPA FDEGPLDAKG KNVVVIGGGD
TAMDCVRTAI RQGAASVKCL YRRDRANMPG SQRETKNAEE EGVEFVWLSA PEAFDGGETV
GGVRAIRMRL GEPDMSGRRT PEPDPGSEFR IEADLVIKAL GFDPEDLPGM FGAPELSVTR
WGTLRVDHKT MQTSLEGVFA AGDIVRGASL VVWAIRDGRD VAVRMHAYLK AKAERVELAA
GKVAA
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