| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0647 |
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| Symbol | |
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| ID | 5199710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 702384 |
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| End bp | 703274 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580191 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001261153 |
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| Protein GI | 148553571 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.020642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA TCGGTTTCAT CGGGCTCGGC AATATGGGCG GCGGCATGGC CGCGAATCTG
GCGAAGAAGG GCCATGACGT GCGCGCCTTC GACCTGTCGA AGGAGGCGCT CGACCGCGCC
GTGGCGGCGG GGTGCGTCGC CGCCGGGTCG GCGGCCGAGG CGGTCAAGGA CGCCGAATAT
GTCGTCAGCA TGTTGCCGGC GGGCCAGCAT GTCCGCGCGG TCTATGAGAA TGACGTGTTC
GGATCGGTGC CGCCCTCGGC GTTGCTGATC GATTGCTCGA CGATCGACGT CGCCTCGGCG
CGCGCCGTCA ACGGCGCGGC GGCGGCCAAG GGGCTGGCGA TGGTCGACGC CCCCGTCTCG
GGCGGCATCG CCGCCGCCAA TGGCGGCACG CTGACCTTCA TGGTCGGCGG CAGCGCCGAG
CATTTCGCCC GCGCCGAGCC GGTGCTCGCG CTGATGGGCA AGGCGGTGAT CCATGCCGGC
GGCGCCGGTT CGGGCCAGGC GGCGAAGATC GTCAACAACA TGATCCTCGG CGCGACGATG
GTCGCGACCT GCGAGGCCTT CGCGCTCGCG AGCAAGCTCG GCCTCGACCT CCAGACCTTC
TACGACATCT CGTCCAAGGC GAGCGGGCAG AGCTGGTCGA TGACCAGCTA TTGCCCGGTC
CCCGGCGTCG GTCCGCAGAG CCCGGCCGAC AACGGCTATG AAGGCGGGTT CGCGGCGGGC
CTGATGCTCA AGGACCTCAA GCTCGCGGTC GAGGCGGCGC AGGGCGTCGG CGCCAGCGTG
CCGATGGGCG GTCATGCCGA AAGCCTCTAC CAGGCCTTCG CCAACCTCGG CGGCGCCGGC
AAGGACTTCT CGGCGATCAT CAAGCTGCTC GACGGTAGCT ACAGGGTCTG A
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| Protein sequence | MATIGFIGLG NMGGGMAANL AKKGHDVRAF DLSKEALDRA VAAGCVAAGS AAEAVKDAEY
VVSMLPAGQH VRAVYENDVF GSVPPSALLI DCSTIDVASA RAVNGAAAAK GLAMVDAPVS
GGIAAANGGT LTFMVGGSAE HFARAEPVLA LMGKAVIHAG GAGSGQAAKI VNNMILGATM
VATCEAFALA SKLGLDLQTF YDISSKASGQ SWSMTSYCPV PGVGPQSPAD NGYEGGFAAG
LMLKDLKLAV EAAQGVGASV PMGGHAESLY QAFANLGGAG KDFSAIIKLL DGSYRV
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