| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0645 |
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| Symbol | |
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| ID | 5199708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 699214 |
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| End bp | 700434 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580189 |
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| Product | polyhydroxyalkanoate depolymerase, intracellular |
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| Protein accession | YP_001261151 |
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| Protein GI | 148553569 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
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| TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.287948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTACG ACGCTTATGA GTTCCAGCGC ACCATGCTGT CCGCGGCCAG CGCCTGGGCC
AATCTGGGCG CCCAGTGGCT CCAGAATCCA CTGAATCCGA TGTCCTACAG CAATATGGCG
CCGATGATGG CGTCGGGGCT CGACGTGTTC GCCCATGCCT CCGCCTCGCG CGGCAAGCCC
GATTTCGGCT TCACCCAGGT CGAGGTCGAC GGCCGCAAGG TCGCCGTCAC CGAGGAGATC
ATCCTCCGCA AGCCGTTCGG CCAGCTCAAG CGCTTCCGCC GCCGCGGCAT CACCGGGCAG
CCCAAGCTGC TCGTCGTCGC GCCGATGTCG GGCCATTATG CGACGCTGCT GCGCGGCACG
GTCGAGCGGC TGCTGCCGCG CCACGACGTC TATATCACCG ACTGGCGCGA CGCGCGGCTC
GTCCCGCTCG AGGAGGGGCG CTTCGATCTC GACGACTATA TCGACTATCT GGTCGAGTTC
CTCGAGAAGC TCGGGCCCGG CACGCACATG CTGGCGGTGT GCCAGCCTTC GGTCCCGGCC
TATGCCGCCG CGGCGCTGAT GGCGGCGGAC AACCATCCCT GCCGTCCGAA GACGCTCACC
ATGATGGGCG GCCCGGTCGA CACGCGCGAG GCGCCGACCG CGGTCAATAC CGTCGCCACC
CAGCGCCCGC TCGCCTGGTT CGAGCAGAAC GTCATCCACA CCGTGCCGGT CTATTATCCG
GGCAGCGGCC GCCGGGTCTA TCCGGGCTTC CTCCAGCTCA CCGGCTTCAT GGCGATGAAC
CTGGGCAATC ATCTCGTCAG CCATTGGAGC ATGTTCAAGC ATCTCGTCGA AGGCGACGAG
GAGGGCGCGG ATTCGACCAA GGCCTTCTAC GACGAATATC GTTCGGTCTG CGACATGACC
TCCGAATTTT ACCTCCAGAC GATCGACCAG GTGTTCCAGC GCCACCTGTT GCCCAGGGGC
GAGTTCCTGC ATCGCGGCCG GCCGGTCGAT CCCGGAGCGA TCAAGGATAT CGGCCTGCTG
GCGATCGAGG GCGAGCGCGA CGATATCTCG GGGATCGGCC AGACCAAGGC GGCGCTGACG
CTCGCGACTT CGCTGCCCGC GAAGAAGAAG AAATATCTGC TCGCCGAGCG GGTCGGCCAT
TACGGCATCT TCAACGGCCG GCGCTGGCGC GAGAAGATCG CCCCGGTCGT GGACGACTGG
ATCGCGGCGC ATGATGGGTA G
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| Protein sequence | MLYDAYEFQR TMLSAASAWA NLGAQWLQNP LNPMSYSNMA PMMASGLDVF AHASASRGKP
DFGFTQVEVD GRKVAVTEEI ILRKPFGQLK RFRRRGITGQ PKLLVVAPMS GHYATLLRGT
VERLLPRHDV YITDWRDARL VPLEEGRFDL DDYIDYLVEF LEKLGPGTHM LAVCQPSVPA
YAAAALMAAD NHPCRPKTLT MMGGPVDTRE APTAVNTVAT QRPLAWFEQN VIHTVPVYYP
GSGRRVYPGF LQLTGFMAMN LGNHLVSHWS MFKHLVEGDE EGADSTKAFY DEYRSVCDMT
SEFYLQTIDQ VFQRHLLPRG EFLHRGRPVD PGAIKDIGLL AIEGERDDIS GIGQTKAALT
LATSLPAKKK KYLLAERVGH YGIFNGRRWR EKIAPVVDDW IAAHDG
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