Gene Swit_0632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0632 
Symbol 
ID5198383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp686071 
End bp687243 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID640580176 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001261138 
Protein GI148553556 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.697717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA TCGTGATCAC CGGCGCCAAG CGTACCCCCG TCGGCAGCTT CCTGGGCGCG 
TTCGCGACCA CCCCGGCGCA TGAGCTGGGC CGCGTGGCGA TCGAGGCTGC GCTCGCCCAG
GCGGGCGTCG CGGCGGCCGA GGTGCAGGAG GCCGTGCTCG GCCAGGTGCT GACCGCCGGC
CAGGGCCAGA ACCCGGCGCG CCAGGCCGCG ATCAACGCGG GCATCCCCAA GGAGGCGACC
GCTTTCGGCG TCAACCAGGT CTGCGGCTCC GGCCTGCGCG CCGTCGCCCT CGCCGCCCAG
TCGATCCGCT GCGGCGACGC GCGGGTGGTG GTCGCCGGCG GCCAGGAGAG CATGTCGCTG
TCGATGCACG CGCAGAATCT GCGCGGCGGC TTCAAGATGG GCAACGCCTC GCTGGTCGAC
ACCATGATCC TCGACGGCCT GACCGACGCC TTCAACGGCT ATCATATGGG CATCACCGCC
GAGAATCTGG CGGAGAAGTA CCAGATCGGC CGCGCCGAGC AGGACGCCTT CGCCGTCGCC
AGCCAGAACA AGGCCGAAGC CGCGCAGGCC GCCGGCCGCT TCGACGACGA GATCGCCGCC
GTCACCGTCA AGGGCCGCAA GGGCGACACC ATCGTGGCGC GCGACGAATA TATCCGCGCC
GGCGCGACGA TCGAGGCGAT GTCCGCGCTC AAGCCCGCCT TCAAGAAGGA CGGCACCGTC
ACCGCCGCCA ACGCCAGCGG CATCAACGAC GGTGGCGCCG CGCTGGTGCT GATGTCGGCG
GAGGACGCCG CCAAGCGCAG CGCCCCCGTG CTCGGCCGGA TCGCGAGCTG GGCGACCTGC
GGCGTCGACC CGTCGATCAT GGGAATCGGC CCGGCGCCGG CGTCGAAGCT GGCGCTCGAA
AAGGCCGGCT GGACGATCGC CGACCTCGAC CTGATCGAAG CCAATGAGGC GTTCGCGGCG
CAGGCTCTGG CGGTCGGCAA GGAGCTCGGC TGGAACGCCG ACATCGTCAA CGTCAATGGC
GGCGCGATCG CGATCGGCCA CCCGATCGGC GCCTCGGGCG CGCGCGTGTT GACCACGCTG
ATCTACGAAA TGGCGAAGCG CGACGCGAAG AAGGGCCTCG TCACCCTGTG CATCGGCGGC
GGCATGGGCA TCGCCATGTG CATCGAACGC TGA
 
Protein sequence
MTDIVITGAK RTPVGSFLGA FATTPAHELG RVAIEAALAQ AGVAAAEVQE AVLGQVLTAG 
QGQNPARQAA INAGIPKEAT AFGVNQVCGS GLRAVALAAQ SIRCGDARVV VAGGQESMSL
SMHAQNLRGG FKMGNASLVD TMILDGLTDA FNGYHMGITA ENLAEKYQIG RAEQDAFAVA
SQNKAEAAQA AGRFDDEIAA VTVKGRKGDT IVARDEYIRA GATIEAMSAL KPAFKKDGTV
TAANASGIND GGAALVLMSA EDAAKRSAPV LGRIASWATC GVDPSIMGIG PAPASKLALE
KAGWTIADLD LIEANEAFAA QALAVGKELG WNADIVNVNG GAIAIGHPIG ASGARVLTTL
IYEMAKRDAK KGLVTLCIGG GMGIAMCIER