Gene Swit_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0622 
Symbol 
ID5199858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp675835 
End bp676719 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID640580166 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001261128 
Protein GI148553546 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.899409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTC TCAAGGCCCT CAAGGTCCGC ATCACTTCGG TGAAGTCGAC CCAGAAGATC 
ACCAAGGCGA TGAAGATGGT CGCCGCCGCG AAGCTGCGCC GCGCGCAGAT GGCTGCGGAA
GCCGGTCGCC CCTATGCCGA GCGGCTGGAC GCGGTGATGT CGAGCCTCGC TTCGAAGGTG
ACGGTCGGGC CGCAGAGCCC GAAGCTGCTC GCCGGGACCG GCAACGACCA GGTTCACCTG
CTCGTCGTCG CGACCTCGGA GCGCGGCCTC GCCGGTGCGT TCAACACCAA CATCGTCCGT
GCCGCGCGCA AGACCGCGGA CAGCCTGATC GCGCAGGGCA AGACGGTGAA ATTCTACCTG
ATCGGCAAGA AGGGCCGCGC CGTGCTGCAG CGGCTCTTCC CCGGCAAGAT CGTCCACCAG
GTCGACCAGA GCCACATCAA GAACGTCGCA TTCAGCGATG CCCATATGGT GGCCGAAGAC
CTGATCGGTC GCTATTCGGC CGGCGAGTTC GATGTCGCGC ACCTGTTCTT CGCCAAGTTC
CAGTCGGCGC TGGTCCAGGA GCCGACCGAG TTGCAGATCA TCCCGGTCCC GCTGACCGCC
GACACCGGCG CGGCGGCAAC GGGCGCCTCG GCGGCGGTCG AATATGAGCC GGACGAGGAA
GCGATCCTCA CCGAGCTGCT GCCGCGCAAC GTCGCCGTCC AGCTGTTCCG CGCGATGCTG
GAGAATGCCG CGTCCGAACA GGGCAGCCGC ATGACCGCGA TGGACAACGC GACCCGCAAT
GCCGGCGAGA TGATCAACAA GCTGACGATC CAGTACAACC GGACCCGTCA GGCGGCGATC
ACCACCGAGC TCATCGAAAT CATCGCTGGC GCTGAAGCGC TGTAA
 
Protein sequence
MASLKALKVR ITSVKSTQKI TKAMKMVAAA KLRRAQMAAE AGRPYAERLD AVMSSLASKV 
TVGPQSPKLL AGTGNDQVHL LVVATSERGL AGAFNTNIVR AARKTADSLI AQGKTVKFYL
IGKKGRAVLQ RLFPGKIVHQ VDQSHIKNVA FSDAHMVAED LIGRYSAGEF DVAHLFFAKF
QSALVQEPTE LQIIPVPLTA DTGAAATGAS AAVEYEPDEE AILTELLPRN VAVQLFRAML
ENAASEQGSR MTAMDNATRN AGEMINKLTI QYNRTRQAAI TTELIEIIAG AEAL