Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0621 |
Symbol | |
ID | 5199857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 674245 |
End bp | 675774 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580165 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_001261127 |
Protein GI | 148553545 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.953551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCC GCGCCGCAGA AATCTCCAAG GTCATCCGCG ACCAGATCGC CAGCTTCGGC AGCGAAGCGC AGATCTCCGA AGTCGGCCAG GTGCTGTCGG TCGGCGACGG CATCGCCCGC ATCCACGGCC TCGACAATGT CCAGGCCGGC GAGATGATCG AATTCTCGAA CGGCATCAAG GGCATGGCCC TCAACCTCGA AGCCGATAAC GTCGGCGCCG TGATCTTCGG CTCGGACAGC CAGATCAAGG AAGGCGATGT CGTCAAGCGG ACCGGCACCA TCGTCGACGT GCCGGTGGGC AAGGGCCTGC TCGGCCGCGT GGTCGACGGC CTCGGCAACC CGATCGACGG CAAGGGCCCG ATCGTCGCCG AGCAGCGCAG CCGCGTCGAG GTCAAGGCGC CCGGCATCAT CCCCAGGAAG TCGGTGCACG AGCCGGTGCA GACCGGCCTC AAGGCGCTCG ACGCGCTCGT CCCCGTCGGC CGCGGCCAGC GCGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGTCGGC CGTCGCGATC GACACCTTCA TCAACCAGAA GACCGCCAAC GCGGGTACCG ACGAGAGCAA GAAGCTCTAC TGCGTGTATG TCGCGATCGG CCAGAAGCGC TCGACCGTCG CCCAGCTCGT CAAGACGCTC GAAGAGAACG GCGCGATGGA ATATTCGATC GTGGTCGCCG CGACCGCGTC GGATCCCGCT CCGCTCCAGT ATCTCGCGCC GTACACCGGC GTCGCCATGG GCGAGTATTT CCGCGACAAC GGCATGCACG GCCTGATCGT CTATGACGAT CTTTCCAAGC AGGCGGTCGC CTATCGCCAG ATGTCGCTGC TGCTGCGCCG TCCGCCGGGC CGCGAAGCCT ATCCGGGCGA CGTCTTCTAT CTGCACAGCC GCCTGCTCGA GCGCGCCGCC AAGCTGAACG ACGCCAACGG CAACGGCTCG CTGACCGCGC TGCCGATCAT CGAAACCCAG GCGGGCGACG TGTCGGCCTA TATCCCGACC AACGTGATCT CGATCACCGA CGGCCAGATC TTCCTCGAGA CCGACCTGTT CTACCAGGGC GTCCGTCCGG CCATCAACGT GGGTCTGTCG GTGTCGCGCG TCGGCTCGGC CGCGCAGACC AAGGCGATGA AGAAGGTTGC CGGCTCGATC AAGCTCGAGC TGGCCCAGTA TCGCGAAATG GCCGCCTTCG CGCAGTTCGG CTCGGATCTC GACGCCTCGA CCCAGCGCCT GCTCAACCGC GGCGCGCGCC TGACCGAGCT GCTCAAGCAG CCCCAGTTCC AGCCGCTGCC CTTCGAGGAG CAGGTCGCGT CGATCTTCGC CGGCGTGAAC GGTTATCTGG ACAGCATCCC GACCAACGCG GTGACCCGCT TCGAAGCCGG CTTCCTCGCC GAGATGCGCT CGAAGCACGC CGACGTCCTG GCCGCGATCC GCGACAGCAA GGACCTGTCG GCGGACTCGA CCGCGGCGCT CAAGTCGGCG CTTGAAGCCT TCGTGAAGAC CTTCGCGTAA
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Protein sequence | MDIRAAEISK VIRDQIASFG SEAQISEVGQ VLSVGDGIAR IHGLDNVQAG EMIEFSNGIK GMALNLEADN VGAVIFGSDS QIKEGDVVKR TGTIVDVPVG KGLLGRVVDG LGNPIDGKGP IVAEQRSRVE VKAPGIIPRK SVHEPVQTGL KALDALVPVG RGQRELIIGD RQTGKSAVAI DTFINQKTAN AGTDESKKLY CVYVAIGQKR STVAQLVKTL EENGAMEYSI VVAATASDPA PLQYLAPYTG VAMGEYFRDN GMHGLIVYDD LSKQAVAYRQ MSLLLRRPPG REAYPGDVFY LHSRLLERAA KLNDANGNGS LTALPIIETQ AGDVSAYIPT NVISITDGQI FLETDLFYQG VRPAINVGLS VSRVGSAAQT KAMKKVAGSI KLELAQYREM AAFAQFGSDL DASTQRLLNR GARLTELLKQ PQFQPLPFEE QVASIFAGVN GYLDSIPTNA VTRFEAGFLA EMRSKHADVL AAIRDSKDLS ADSTAALKSA LEAFVKTFA
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