Gene Swit_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0621 
Symbol 
ID5199857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp674245 
End bp675774 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content66% 
IMG OID640580165 
ProductF0F1 ATP synthase subunit alpha 
Protein accessionYP_001261127 
Protein GI148553545 
COG category[C] Energy production and conversion 
COG ID[COG0056] F0F1-type ATP synthase, alpha subunit 
TIGRFAM ID[TIGR00962] proton translocating ATP synthase, F1 alpha subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.953551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCC GCGCCGCAGA AATCTCCAAG GTCATCCGCG ACCAGATCGC CAGCTTCGGC 
AGCGAAGCGC AGATCTCCGA AGTCGGCCAG GTGCTGTCGG TCGGCGACGG CATCGCCCGC
ATCCACGGCC TCGACAATGT CCAGGCCGGC GAGATGATCG AATTCTCGAA CGGCATCAAG
GGCATGGCCC TCAACCTCGA AGCCGATAAC GTCGGCGCCG TGATCTTCGG CTCGGACAGC
CAGATCAAGG AAGGCGATGT CGTCAAGCGG ACCGGCACCA TCGTCGACGT GCCGGTGGGC
AAGGGCCTGC TCGGCCGCGT GGTCGACGGC CTCGGCAACC CGATCGACGG CAAGGGCCCG
ATCGTCGCCG AGCAGCGCAG CCGCGTCGAG GTCAAGGCGC CCGGCATCAT CCCCAGGAAG
TCGGTGCACG AGCCGGTGCA GACCGGCCTC AAGGCGCTCG ACGCGCTCGT CCCCGTCGGC
CGCGGCCAGC GCGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGTCGGC CGTCGCGATC
GACACCTTCA TCAACCAGAA GACCGCCAAC GCGGGTACCG ACGAGAGCAA GAAGCTCTAC
TGCGTGTATG TCGCGATCGG CCAGAAGCGC TCGACCGTCG CCCAGCTCGT CAAGACGCTC
GAAGAGAACG GCGCGATGGA ATATTCGATC GTGGTCGCCG CGACCGCGTC GGATCCCGCT
CCGCTCCAGT ATCTCGCGCC GTACACCGGC GTCGCCATGG GCGAGTATTT CCGCGACAAC
GGCATGCACG GCCTGATCGT CTATGACGAT CTTTCCAAGC AGGCGGTCGC CTATCGCCAG
ATGTCGCTGC TGCTGCGCCG TCCGCCGGGC CGCGAAGCCT ATCCGGGCGA CGTCTTCTAT
CTGCACAGCC GCCTGCTCGA GCGCGCCGCC AAGCTGAACG ACGCCAACGG CAACGGCTCG
CTGACCGCGC TGCCGATCAT CGAAACCCAG GCGGGCGACG TGTCGGCCTA TATCCCGACC
AACGTGATCT CGATCACCGA CGGCCAGATC TTCCTCGAGA CCGACCTGTT CTACCAGGGC
GTCCGTCCGG CCATCAACGT GGGTCTGTCG GTGTCGCGCG TCGGCTCGGC CGCGCAGACC
AAGGCGATGA AGAAGGTTGC CGGCTCGATC AAGCTCGAGC TGGCCCAGTA TCGCGAAATG
GCCGCCTTCG CGCAGTTCGG CTCGGATCTC GACGCCTCGA CCCAGCGCCT GCTCAACCGC
GGCGCGCGCC TGACCGAGCT GCTCAAGCAG CCCCAGTTCC AGCCGCTGCC CTTCGAGGAG
CAGGTCGCGT CGATCTTCGC CGGCGTGAAC GGTTATCTGG ACAGCATCCC GACCAACGCG
GTGACCCGCT TCGAAGCCGG CTTCCTCGCC GAGATGCGCT CGAAGCACGC CGACGTCCTG
GCCGCGATCC GCGACAGCAA GGACCTGTCG GCGGACTCGA CCGCGGCGCT CAAGTCGGCG
CTTGAAGCCT TCGTGAAGAC CTTCGCGTAA
 
Protein sequence
MDIRAAEISK VIRDQIASFG SEAQISEVGQ VLSVGDGIAR IHGLDNVQAG EMIEFSNGIK 
GMALNLEADN VGAVIFGSDS QIKEGDVVKR TGTIVDVPVG KGLLGRVVDG LGNPIDGKGP
IVAEQRSRVE VKAPGIIPRK SVHEPVQTGL KALDALVPVG RGQRELIIGD RQTGKSAVAI
DTFINQKTAN AGTDESKKLY CVYVAIGQKR STVAQLVKTL EENGAMEYSI VVAATASDPA
PLQYLAPYTG VAMGEYFRDN GMHGLIVYDD LSKQAVAYRQ MSLLLRRPPG REAYPGDVFY
LHSRLLERAA KLNDANGNGS LTALPIIETQ AGDVSAYIPT NVISITDGQI FLETDLFYQG
VRPAINVGLS VSRVGSAAQT KAMKKVAGSI KLELAQYREM AAFAQFGSDL DASTQRLLNR
GARLTELLKQ PQFQPLPFEE QVASIFAGVN GYLDSIPTNA VTRFEAGFLA EMRSKHADVL
AAIRDSKDLS ADSTAALKSA LEAFVKTFA