Gene Swit_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0619 
Symbol 
ID5200713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp672812 
End bp673342 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID640580163 
Productheat shock protein Hsp20 
Protein accessionYP_001261125 
Protein GI148553543 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGGC GGATGCTCCG CGGACCGACA TGGTCAACAT CGCTTGATGA GGAAACAGAC 
CCGATGCGTA GCCTTGATTT CGCTCCCCTC CTCCGATCCT CGATCGGCTT CGAGAATCTC
AACCGCCTCG TCGACTTCGC GCGCGGCGAC GGCGACAGCT ATCCGCCCTA CAATATCGAG
AAGACGGGCG ACGGCGCCTA TCGCATCCAG ATGGCGCTCG CCGGCTTCAC CCGCGACGAG
ATCGACGTGA CCGTGCAGGA CAATGTGCTG ATCATCATCG GCCGCGCCGT CGAGGCCACC
GATGCCGACA AGCGCGAATT CCTGCATCGC GGCATCGCCA AGCGCGCGTT CGAGCGCCGT
TTCCAGCTCG CCGACACCAT CAAGGTGACC GGCGCCGGCT ATGAGAACGG CCTGCTCAAC
GTCGAGCTGG TGCGCGAGAT CCCCGAGCAC AAGAAGCCGC GCCGCATCGC CATCGACGGC
GTCGAGCCCC AGTCGGTGAT CGACGCGGAG CCGAGCAAGG CCGCCGCGTA G
 
Protein sequence
MVRRMLRGPT WSTSLDEETD PMRSLDFAPL LRSSIGFENL NRLVDFARGD GDSYPPYNIE 
KTGDGAYRIQ MALAGFTRDE IDVTVQDNVL IIIGRAVEAT DADKREFLHR GIAKRAFERR
FQLADTIKVT GAGYENGLLN VELVREIPEH KKPRRIAIDG VEPQSVIDAE PSKAAA