| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0611 |
|---|
| Symbol | |
|---|
| ID | 5199308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 666017 |
|---|
| End bp | 667036 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640580155 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_001261117 |
|---|
| Protein GI | 148553535 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.194417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCT ATTATGATCG TGATGCCGAC ATCGGCCTCA TCAAGACCAA GAAGGTGGCG
ATCGTCGGCT ATGGCAGCCA GGGCCACGCC CATGCCCAGA ACCTGCAGGA CTCGGGCGTC
GCCGACGTCG CGATCGCGCT GCGCCCCGGC TCGGCCACCG CGAAGAAGGC CGAAGGCGCC
GGCTTCAAGG TGCTGTCGAA CGCCGACGCG GCCAAGTGGG CCGACATCGT CATGATCCTG
GCGCCCGACG AGCACCAGGC CGCGATCTAC AATGACGACC TGCGCGACAA TCTGAAGCCG
GGCGCGGCGC TCGCCTTCGC CCATGGCCTC AACGTCCATT TCGGCCTGAT CGAGCCGCGC
GCCGACATCG ACGTGTTCAT GATCGCGCCG AAGGGCCCCG GCCACACCGT CCGTTCCGAA
TATCAGCGCG GCGGCGGCGT GCCCTGCCTG ATCGCGATCG CCCAGGACGC CAGCGGCAAC
GCGCACGACG TCGCCCTGTC CTACGCCTCG GCGATCGGCG GCGGCCGTTC GGGCGTGATC
GAGACGACCT TCAAGGAAGA GTGCGAGACC GACCTGTTCG GCGAGCAGGC GGTGCTGTGC
GGCGGCCTCA GCCACCTGAT CATGGCCGGC TTCGAGACGC TGGTCGAGGC GGGCTACGCC
CCCGAGATGG CCTATTTCGA ATGCCTCCAC GAAGTGAAGC TGATCGTCGA CCTGATGTAT
GAGGGCGGCA TCGCCAACAT GCGCTACTCG ATCTCGAACA CCGCCGAATA TGGCGACATC
CACACCGGCC CGCGCGTCAT CACCTCGGAG ACCAAGGCCG AGATGAAGCG CGTGCTCGAC
GACATCCAGA AGGGCAAGTT CGTCAAGCGC TTCGTCCTCG ACAACCGCGC CGGCCAGCCC
GAGCTGAAGG CGAGCCGCAA GCTCGTCGCC GAGCATCCGA TCGAGAAGGT CGGCGCCGAA
CTGCGCGCGA TGATGCCCTG GATCAGCAAG AACCAGCTGG TCGACAAGGC CAAGAACTGA
|
|---|
| Protein sequence | MRVYYDRDAD IGLIKTKKVA IVGYGSQGHA HAQNLQDSGV ADVAIALRPG SATAKKAEGA
GFKVLSNADA AKWADIVMIL APDEHQAAIY NDDLRDNLKP GAALAFAHGL NVHFGLIEPR
ADIDVFMIAP KGPGHTVRSE YQRGGGVPCL IAIAQDASGN AHDVALSYAS AIGGGRSGVI
ETTFKEECET DLFGEQAVLC GGLSHLIMAG FETLVEAGYA PEMAYFECLH EVKLIVDLMY
EGGIANMRYS ISNTAEYGDI HTGPRVITSE TKAEMKRVLD DIQKGKFVKR FVLDNRAGQP
ELKASRKLVA EHPIEKVGAE LRAMMPWISK NQLVDKAKN
|
|---|
| |