| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0605 |
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| Symbol | |
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| ID | 5200481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 660201 |
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| End bp | 661295 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640580149 |
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| Product | sporulation domain-containing protein |
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| Protein accession | YP_001261111 |
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| Protein GI | 148553529 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily
[COG3147] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.690459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.306587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGCT TTGTCCTGGG CTGTGCGTTG GCGGCGGCGA CCGTTGCCGC ACCGGCGATC
GCGGGCGTCA AGGAAGGCGT CGAGGCCTGG GCGAAGGGCG ATTACCCCAC CGCCATCGCC
GAATGGCGCG GCCCCGCCGC GGCCGGCGAT CCCGACGCCC AGTTCAACCT CGGACAGGCC
TACAAGCTCG GCCGCGGCGT GCCGATGGAG CCAGCGACGG CGCTCGACTG GTATCGCAAG
GCGGCCGCAT CGGGCCATGA GCAGGCGCAG GCGACGCTCG GCCTGCTGCT GTTCCAGAAC
GGACAGCGCC CCGAGGCGAT GACCTGGCTG AAGAAGGCCG CCGACCAGGG CGAGGCGCGC
GCGCAATATG TCGTCGGCAC CGCCTATTTC AACGGCGACC TGCTGCCCCG CGACTGGCCG
CGCGCCTATG CGCTGATGAC CCGCGCCAAG GCGGCGAACA TTGGCGCGGC GACCACCAGC
CTCCAGCAGA TGGACCAGAT CATCCCGCAG GAGCAGCGCG AGGCCGGCCT CGCCCTCTCC
CGCGAGATGG AGCGGACCGC GCAGCTACGA ACCAACGACG TCGCCACGCC GGGCATGCCG
CTGACCATGC GCAACTCGGT GACGCCGCCG GTCGGCCAGA CCAGCGTGCC GCCCTCGACG
ACGTCGACAC CGGTGATGGC CCCCGCTCCG GCGCCGACGG CCGCGCCGAC GATCATGGCC
CAGGCCGGCG GTACGCCCTG GCGGGCGCCC ACCACCGCCC CGGCCGCATC GCCGCCGCCC
GCGCCCAAGC CGACCGCGCC GAAGAGCGTG GCCCCCACGC CTGCCCCTGC TCCTGCTCCT
GCTCCCGCGA TCGTCGCGTC ACCGAGCGGC GGCTGGAAGA TCCAGCTCGG CGCCTTTTCG
AGCGCCGACG CCGCGCGCAA CGCCTGGACC AGCCTGTCGG CGCGCGCCGG CCTCAAGGCG
CTGACGCCGA GCTTCTCGGC GGTCGGCGCG CTGACGCGTC TCCAGGCGGG GCCGCTCGCC
TCGCGCACGG CGGCGAACCA GGCCTGCGCG GCGGTGAAGG CGGCGGGAAC CACCTGCTTC
CCGGTCGCGC CCTGA
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| Protein sequence | MRSFVLGCAL AAATVAAPAI AGVKEGVEAW AKGDYPTAIA EWRGPAAAGD PDAQFNLGQA
YKLGRGVPME PATALDWYRK AAASGHEQAQ ATLGLLLFQN GQRPEAMTWL KKAADQGEAR
AQYVVGTAYF NGDLLPRDWP RAYALMTRAK AANIGAATTS LQQMDQIIPQ EQREAGLALS
REMERTAQLR TNDVATPGMP LTMRNSVTPP VGQTSVPPST TSTPVMAPAP APTAAPTIMA
QAGGTPWRAP TTAPAASPPP APKPTAPKSV APTPAPAPAP APAIVASPSG GWKIQLGAFS
SADAARNAWT SLSARAGLKA LTPSFSAVGA LTRLQAGPLA SRTAANQACA AVKAAGTTCF
PVAP
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