| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0602 |
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| Symbol | pyrB |
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| ID | 5200478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 656656 |
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| End bp | 657606 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580146 |
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| Product | aspartate carbamoyltransferase catalytic subunit |
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| Protein accession | YP_001261108 |
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| Protein GI | 148553526 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.28274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT CCTTCCCGCA CCGCCATCTC ACCGGCATCT ACGGGCTTCA GCCGCACGAG
ATCCTGTTCC TGCTCGACGA AGCCGAGCAG TGGATCGCGC TCAACCGCGC GACCAGCAAG
CATGACGATC GCCTCGCCGG CCTGACGCTG ATCAATGCCT TCTTCGAAAA CTCGACCCGG
ACGCTGCTAT CGTTCGAGAT CGCCGGCAAG CGCCTCGGCG CCGACGTGGT CAACATGCAG
GTCGGCGCGT CGAGCGTGAA GAAGGGCGAG ACGCTGATCG ACACGGCGAT GACGCTCAAC
GCGATGCGCG CGGACATGAT CGTGATCCGC CACCAGTCGT CGGGCGCTGT GCAGCTCATC
GCCGACAAGG TCGACTGCCC GGTGCTCAAC GCCGGCGACG GACGGCACGA GCATCCGACC
CAGGCGCTGC TCGACGCGCT GACGATCCGC CGCCGCAAGG GCCGGATCGC CGGGCTGGTC
GTCGCGATCT GCGGCGACAT CCTGCACAGC CGGGTGGCGC GGTCGAACAT CCTGGCGCTG
ACCACGCTCG GCGCCGAGGT CCGCGTCGTC GCGCCGCCGA CGCTGATGCC CGCCGCGATC
GAACGAATGG GCGCGGTCCC CTTCCATGAT TTCGACGCGG GGCTCGACGG TGCCGACGTG
GTGATGATGC TCCGACTCCA GAACGAGCGG ATGGACGGGG CCTATCTCCC CTCCCCGCGC
GAGTTCCACG CGCTCTACGG CCTCACCCCC GAACGGCTGG AGCGCGCCGC GCCCGACGCG
CTGGTCATGC ATCCGGGGCC GATGAACCGG GGGGTCGAGA TCACCAGCAG CGTCGCCGAC
CATCCGAGCC GATCGGCGAT CACCGAGCAG GTCGAGATGG GCGTCGCGGT GCGCATGGCC
TGCCTCGACG TGCTGACCCG CCGACGGCGC GGCGTGGAGG GCTGGGCATG A
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| Protein sequence | MSASFPHRHL TGIYGLQPHE ILFLLDEAEQ WIALNRATSK HDDRLAGLTL INAFFENSTR
TLLSFEIAGK RLGADVVNMQ VGASSVKKGE TLIDTAMTLN AMRADMIVIR HQSSGAVQLI
ADKVDCPVLN AGDGRHEHPT QALLDALTIR RRKGRIAGLV VAICGDILHS RVARSNILAL
TTLGAEVRVV APPTLMPAAI ERMGAVPFHD FDAGLDGADV VMMLRLQNER MDGAYLPSPR
EFHALYGLTP ERLERAAPDA LVMHPGPMNR GVEITSSVAD HPSRSAITEQ VEMGVAVRMA
CLDVLTRRRR GVEGWA
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