| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0598 |
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| Symbol | gatA |
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| ID | 5200581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 652919 |
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| End bp | 654406 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580142 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001261104 |
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| Protein GI | 148553522 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.363869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTA TCACCGACCT GGGCCTTGCG GGCCTGCGCG ACGGCTTCCG CGCCGGCGAC
TTCTCGGCGC GCGAGATCGC CGACGCCTTC AATGGCGCCG TCGCCGGCGC CAAGGCGCTC
AACGCCTTCA TCATCGAGAC CCCCGATCAC GCGACCGCGG CGGCCGAGGC GGCCGACAGG
GCGCGCGCGG CGGGCGAGCT GCTGCCGCTG TCGGGCGTTC CGCTCGGCAT CAAGGACCTG
TTCTGCACCG CCGGCCACCA GACCACGGCG GCCAGCCACA TGCTGGGCGG CTTCACGCCG
ACCTATGAAT CGACCGTGAC CGGCAAGCTG TTCGCGGCGG GCGCGGGCAT GCTCGGCAAG
CTCAACCTCG ACCAGTTCGC GATGGGCTCG TCGAACGAGA CCAGCGCCTA TGGCAACGTC
GTCTCGCCGT GGCGGCGCAA CGACGGCGGC AACGCCCCGC TGGCGCCGGG CGGCTCGTCG
GGCGGCTCCT CGTCGGCGAT CGCGGCGCGG ATCGTGCCGG CGGCGACCGG CACCGACACC
GGCGGCTCGA TCCGCCAGCC GGCCGCCTTC ACCGGCATCG CCGGGATCAA GCCGACCTAT
GGCCGCTGCT CGCGCTTCGG CATCGTCGCC TTCGCCTCGT CGCTCGACCA GGCGGGCGCG
ATGGCGCAGG ACGTCCGCGA CAGCGCGATC CTGCTCGAGG CGATGTCGGG CTTCGACCCG
AAGGACTCGA CCTCGCTCGA CGTTGCGGTT CCGAAGTGGG AAGCGAATTT ATCGAGCGAT
CTCAAGGGTA AGAAGGTCGG TATTCCCAAG GAATATCGGG TCGACAACAT GCCCGCCGAG
ATCGACGCGC TGTGGCGGCA GGGCATCGAA TGGCTCCGCG ACGCGGGCGC CGAGATCGTC
GACGTGTCGC TGCCGCACAC CCGCTATGCG CTGCCGACCT ACTATATCAT CGCGCCCGCC
GAGGCGTCGT CGAACCTCGC CCGCTATGAC GGCGTGCGCT ACGGCCTGCG CGACCTGCCC
GAGGGCGCCA ATCTCCAGGA GATGTACGCC GCGACCCGCG CCGCCGGCTT CGGGCCCGAG
GTCAAGCGCC GCATCCTGAT CGGCACCTAT GTGCTGTCGG CGGGCTATTA CGACGCCTAT
TACACCAAGG CGCAGAAGGT CCGCGCGCTG ATCGCCCGCG ACTTCGAGGA GGCGTTCCGG
CAGGTCGACG TGCTGCTGAC GCCGACCGCG CCGTCCGCCG CCTTCGCGCT GGGCGAGAAG
AGCGCCGATC CGCTGGAGAT GTACCTCAAC GACGTCTTCA CCGTCCCGGC CAGCCTCGCG
GGCGTCCCCG CCATGTCGGT GCCGGCGGGC CTCGACGGGC AGGGCCTGCC GCTGGGCCTC
CAGATCATCG GCCGCCCGCT CGACGAGCAG GGCGTCCTCA ACGCCGGCCT CGCGATCGAA
CAGCGCGCCG GCTTCACCGC CAAGCCGCAG AACTGGTGGG CGAAATGA
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| Protein sequence | MTAITDLGLA GLRDGFRAGD FSAREIADAF NGAVAGAKAL NAFIIETPDH ATAAAEAADR
ARAAGELLPL SGVPLGIKDL FCTAGHQTTA ASHMLGGFTP TYESTVTGKL FAAGAGMLGK
LNLDQFAMGS SNETSAYGNV VSPWRRNDGG NAPLAPGGSS GGSSSAIAAR IVPAATGTDT
GGSIRQPAAF TGIAGIKPTY GRCSRFGIVA FASSLDQAGA MAQDVRDSAI LLEAMSGFDP
KDSTSLDVAV PKWEANLSSD LKGKKVGIPK EYRVDNMPAE IDALWRQGIE WLRDAGAEIV
DVSLPHTRYA LPTYYIIAPA EASSNLARYD GVRYGLRDLP EGANLQEMYA ATRAAGFGPE
VKRRILIGTY VLSAGYYDAY YTKAQKVRAL IARDFEEAFR QVDVLLTPTA PSAAFALGEK
SADPLEMYLN DVFTVPASLA GVPAMSVPAG LDGQGLPLGL QIIGRPLDEQ GVLNAGLAIE
QRAGFTAKPQ NWWAK
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