| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0597 |
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| Symbol | gatB |
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| ID | 5200580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 651438 |
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| End bp | 652922 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640580141 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001261103 |
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| Protein GI | 148553521 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.513534 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCT ATCGTATCCA GGGCGCCACC GGCGAATGGG AGGTCGTGAT CGGCCTCGAG
GTCCATGCGC AGGTCGTCTC CAACGCCAAG CTCTTCTCGG GCGCCTCGGC GGCGTTCGGG
GCCGAGCCGA ACCAGAGCGT GTCGCTGGTC GACGCGGCGA TGCCGGGCAT GCTCCCCGTC
CCGAACGAGG AGTGCATCCG CCAGGCGGTC AAGACCGGCA TGGCGCTGGG CGCGGAGATC
AACCGCTGGT CGCGCTTCGA CCGCAAGAAC TACTTCTACG CCGATCTGCC TCAGGGCTAT
CAGATCTCGC AGCTCTACCA CCCGCTGGTG GGCGAGGGCA CGATCACGAT CGACGCCGAC
GAGAAGGCCG GCATCGCCGA GGCCAGGACG ATCGGCGTCG AGCGGCTCCA TGTCGAGCAG
GACGCGGGCA AGCTGATGCA CGACCAGCAT CCGACCCGCT CCTATGTCGA CCTCAACCGA
TCGGGCGTCG CGCTGATGGA GATCGTGTCG AAGCCCGACA TGCGCTCTCC TTCCGAAGCA
GGAGCTTATC TCCGGAAGCT GCGATCGATC CTCCGCTATG TCGGTTCGTG CGACGGCAAT
ATGGAAGAAG GCTCGATGCG CGCCGACGTC AACGTCTCGG TGCGCAAGGC CGGCGATCCG
TTCGGCACCC GGACCGAGAC GAAGAACGTC AACTCGATCC GCTTCGTGAT GGCCGCGATC
GAGAGCGAGG CGAACCGCCA GGTCGACGTG ATCGAAGGCG GCGGCAAGAT CGTCCAGGAG
ACGCGGCTCT ACGATCCCGA CCGGAACGAG ACGCGGTCGA TGCGCTCCAA GGAGGATGCG
CACGACTATC GCTATTTCCC CGATCCCGAT CTGCTGCCGC TCGAGCTGAG CGAGGAATTC
GTCGCGCAGT GCCGCGCCGA GCTGCCCGAG CTGCCCGACG CTAAGCGCGC CCGCTATGAA
GGCGAGCTGG GGCTCCCCGC GTATAACGCC GCGGTGCTGA CCTCGGACGT CGAGACGGCG
CGCTGGTTCG AGGCGCTGCT CGACGCGGCC GGCAAGCCCG GCGCGGAGGT GGCCCGCGCC
GCGTCCAACT GGCTGATCTC CGACCTGTTC GGCGCGCTCA ACCGGCTTGG CAAGGCGATC
GACGAGAGCC CGGTCAGCCC CAGGCAGGGC GCAGAGCTGC TCGCGCTGGT CGCCGACGGA
ACGTTGTCGG GCACGCTGGC CAAGCAGGTG TTCGAGATCA TGCTGGAGAC CGGCGACGAT
CCCGCCAGGA TCGTCGAGGA ACGCGGCCTC AAGCAGACCA GCGACACCGG CGCGATCGAG
GCGGTGATCG CCGAGGTGAT GGCCGCCAAC GCCGACAAGG TCGCCGAATA TCGCGGCGGC
AAGGACAAGC TGTTCGGCTT CTTCGTCGGC CAGACGATGA AGGCGATGGG CGGCAAGGCC
AATCCCGGCG TCGTCAACGA GCTGCTCAAG AAGACGTTGG GCTGA
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| Protein sequence | MSSYRIQGAT GEWEVVIGLE VHAQVVSNAK LFSGASAAFG AEPNQSVSLV DAAMPGMLPV
PNEECIRQAV KTGMALGAEI NRWSRFDRKN YFYADLPQGY QISQLYHPLV GEGTITIDAD
EKAGIAEART IGVERLHVEQ DAGKLMHDQH PTRSYVDLNR SGVALMEIVS KPDMRSPSEA
GAYLRKLRSI LRYVGSCDGN MEEGSMRADV NVSVRKAGDP FGTRTETKNV NSIRFVMAAI
ESEANRQVDV IEGGGKIVQE TRLYDPDRNE TRSMRSKEDA HDYRYFPDPD LLPLELSEEF
VAQCRAELPE LPDAKRARYE GELGLPAYNA AVLTSDVETA RWFEALLDAA GKPGAEVARA
ASNWLISDLF GALNRLGKAI DESPVSPRQG AELLALVADG TLSGTLAKQV FEIMLETGDD
PARIVEERGL KQTSDTGAIE AVIAEVMAAN ADKVAEYRGG KDKLFGFFVG QTMKAMGGKA
NPGVVNELLK KTLG
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