| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0593 |
|---|
| Symbol | clpP |
|---|
| ID | 5200798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 645156 |
|---|
| End bp | 645812 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640580136 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001261099 |
|---|
| Protein GI | 148553517 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.80215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATC CCTTCGAAAC CGGTGAGTTT CTGAATCCGG AAACCGGCGC CCTGGTCCCC
GTCGTGATCG AGCAGTCGAA CCGCGGCGAG CGCAGCTTCG ACATTTATTC GCGCCTGCTG
CGCGAGCGGA TCATCTTCGT GACCGGCCAG GTCGAGGACC ATATGGCCTC GCTCATCACC
GCCCAGCTGC TGTTCCTCGA ATCGGAGAAT CCGAAGAAGG ACATCTTCAT GTACATCAAC
TCGCCGGGCG GCGTGGTGAC GGCCGGCCTC GCGATCCACG ACACGATGCA ATATATCCGC
CCGCGCGTCG GCACGGTCTG CATCGGCCAG GCGGCGTCGA TGGGCAGCTT CCTGCTCGCG
GCGGGCGAGC CGGGGATGCG CGTCGCGCTC ACCAACAGCC GGATCATGGT CCACCAGCCG
TCGGGCGGCG CCCAGGGCAT GGCGGCCGAC ATCGAGATCC AGGCGCGCGA GATCCTGCGC
ATGCGCCACC GGCTCAATTC GCTCTACGCG AAGTACACCA AGCAGCCGAT AGAGGCGATC
GAGGCGGCGA TGGACCGCGA CAAGTTCCTC GAGGCCGACG AGGCCAAGGC CTTCGGCCTG
ATCGACGAGG TGTTCGACAA GCGTCCGAGC CCCGCCGACG AGGCGATCGC CGCCTGA
|
|---|
| Protein sequence | MHNPFETGEF LNPETGALVP VVIEQSNRGE RSFDIYSRLL RERIIFVTGQ VEDHMASLIT
AQLLFLESEN PKKDIFMYIN SPGGVVTAGL AIHDTMQYIR PRVGTVCIGQ AASMGSFLLA
AGEPGMRVAL TNSRIMVHQP SGGAQGMAAD IEIQAREILR MRHRLNSLYA KYTKQPIEAI
EAAMDRDKFL EADEAKAFGL IDEVFDKRPS PADEAIAA
|
|---|
| |