Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0590 |
Symbol | |
ID | 5200795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 639809 |
End bp | 642214 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640580133 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_001261096 |
Protein GI | 148553514 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG0492] Thioredoxin reductase [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG1142] Fe-S-cluster-containing hydrogenase components 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.120802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTG CGGCTCACGC GGCCAAGCTC GGCATACCGC ACGTCCTGCT CGAAAAGACC GACCACCTTT CCGATACGAT CTTCAAATAT CAGAAGGGCA AGCACGTCAT GGCGACGCCG AGCCAGCTCG TGCTGCGCTC GGACGTCGAT TTCGATGCGG GCAAGCGCGA GAAGATCCTC GGCATCTGGG ACGAGCAGAC CGCCGGCCAC AAGGTCAACG TCCGCTTCAA GAGCGAGGTG AAGGCGATCA CCGGGCAGAA GGGCGCGTTC GTCCTCACCC TGGCCGACAA GACCGAGATC CATGCCGAGA CGGTCATCCT GGCGATCGGC ACCCAGGGCA ACCCGAACCT GCTGCGCGCG CCGGGCATCG AGAGCAGCGG CATCCACGTC CAGTATCAGC TCGACGATCC CGGCGAATAT GTCGACGAGC ACATCACCGT CGTCGGATCG GGCGACGCCG GCATCGAGAA TGCGCTGGGC CTCGCGCAGG ACGCGGCGCA GGGCAACATC GTCACCATCC TCAACCGCGG CGCCGATTTC AGCCGCGCCA AGGGCGCCAA CGTCAAGCTG CTGATGCAGG CGCGCGACGA GGGGCGGATG AACGTGATGA CCGACACCTC GCCGAACCGG CTCGAGGCGG GGCATCTCGT CCTCGACACC CGCGACGGCG AGGCGCGCAT CCGCTGCGAC CGCGTGATCG CGCGCATGGG CTCGGCCGCG CCGCGCAAGT TCATCGAGGA ATGCGGGATC GAGTTCACCA GCCCGGACCG CGAGGCCTTC CCGACGCTGT CGCCGCAGTT CGAGACGACC AACGCCGGCA TCTACGTGAT CGGCGCGCTG GCCGGCTATC CGCTGATCAA GCACTGCATG AACCAGGGCT ATGACGTCGT CGAGTTCATC AACGGCAACA CCGGCCTGAA GCCCGCCGAC GAACCGATCC TCGAAGGCAA ATTCGTCAAC CTGCCGGTCA AGAAGTCGGT CGACGAGTGG CTGGAGTTCA TCCGCACCAA CGTCCAGATC CTCAACGACC TGTCGCCGTT GCAGATGCGC GAGTTCATGC TGGACTCCGA AGTCCGCTAC TACGGCAAGA ACGACATCAT CTTCGAGAAG AACGCGCCGG GATCGTCGCT GTTCTGCATC GCGCAAGGAT CGGTCGACAT CCCGCTGCCC GACGGCCGCT CGACCGGGAT CGTCATTCCC GAGGGATCGA TCTTCGGCGA GGTCGGCCTC GTCTCCGGTC GCCGCCGCGG CTCGACGATC CGCTCGGTCG CCGAGACCAT CGTCGTCGAG ATCCCGCGCA ACGCGATCCT CAAGCTGATG GCGTCGGTGC CGGGCGTGAA GCGCGCCGTC ACCCGCATCT CCACCGAGCG CCAGCTCCTC CAGATGTGGC AGTCGGGGCT CCAGCCCGCC GACCTGGCCG AGGTGCTGGA GACCGCCGAG ATCAAGGGCA TCCGCGCCGG CGAGGCGATC TTCCGCGAGG GCGAGGAAGG CAATGACGTC TATGTGATCC GGTCGGGATC GGTGGTCGTC GAGAAGGCGA TCGGCGGCAA GCCGGTGTTC CTCTCCTATG TTCCCGCCGG CAATTATGTC GGCGAGCTCG AACTGTTCGA CAACGGCATC CGCAAGCAGA CCGTGCGCGC CGCGGTGAAG TCGGAGGTGA TCAAGCTCGG CGGCGATGCG TTCCGCCGGC TGCTGGAGGC CAAGCCGGAA TTCTTCGCCC GGGCGAAGGT GGCGATCGGC GAGCGCGAGG ACCTCGCCTC GTTCATCGAG GCGAAGAAGG ACAGCTTCGC CACCGTCGTC GACATGTACA GCTCGGTCGC GAACTTCCTG GTCGACAACG GCGTCGGCGA GGCGACCGAC GTGCTGCTGA TCGACGAGAA TCTCTGCGTC GGCTGCGACA ATTGCGAGAA GGCCTGCGCC GACAGCCATG AGGGCATCTC GCGGCTCGAC CGCGAGGCGG GGCGCACCTT CGCGCATCTC CACGTGCCGA CGAGTTGCCG CCATTGCGAG CATCCGCACT GCATGGCCGA CTGCCCGCCG ACCGCGATCC ATCGCGGCCA GGACGGCGAG GTCTATATCG ACGACACCTG CATCGGCTGC GGCAACTGCC AGCGGAACTG CCCCTATGGC GTGATCCGCA TGGAGAAGGA GCCGCCGCAG AAGCCTTCCC TGTGGAAATG GTTCCTGTTC GGGCAGGGGC CGGGACCGGG AGAGCCCAGC CATGACTGGG CCTATGCCAA TGCGACGCCC GGCGTCGAGA AGGCGAAACG CGCGGTCAAG TGCGACATGT GCTCGGGTAT CGAGGGCGGC CCGAGCTGTG TCCGCGCCTG TCCGACGGGG GCGGCGATCC GTGTCGCGCC CGAGGAATTC CTGACGGTCG CCCGGCTGCA ACGGGACGAC GCCTGA
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Protein sequence | MSAAAHAAKL GIPHVLLEKT DHLSDTIFKY QKGKHVMATP SQLVLRSDVD FDAGKREKIL GIWDEQTAGH KVNVRFKSEV KAITGQKGAF VLTLADKTEI HAETVILAIG TQGNPNLLRA PGIESSGIHV QYQLDDPGEY VDEHITVVGS GDAGIENALG LAQDAAQGNI VTILNRGADF SRAKGANVKL LMQARDEGRM NVMTDTSPNR LEAGHLVLDT RDGEARIRCD RVIARMGSAA PRKFIEECGI EFTSPDREAF PTLSPQFETT NAGIYVIGAL AGYPLIKHCM NQGYDVVEFI NGNTGLKPAD EPILEGKFVN LPVKKSVDEW LEFIRTNVQI LNDLSPLQMR EFMLDSEVRY YGKNDIIFEK NAPGSSLFCI AQGSVDIPLP DGRSTGIVIP EGSIFGEVGL VSGRRRGSTI RSVAETIVVE IPRNAILKLM ASVPGVKRAV TRISTERQLL QMWQSGLQPA DLAEVLETAE IKGIRAGEAI FREGEEGNDV YVIRSGSVVV EKAIGGKPVF LSYVPAGNYV GELELFDNGI RKQTVRAAVK SEVIKLGGDA FRRLLEAKPE FFARAKVAIG EREDLASFIE AKKDSFATVV DMYSSVANFL VDNGVGEATD VLLIDENLCV GCDNCEKACA DSHEGISRLD REAGRTFAHL HVPTSCRHCE HPHCMADCPP TAIHRGQDGE VYIDDTCIGC GNCQRNCPYG VIRMEKEPPQ KPSLWKWFLF GQGPGPGEPS HDWAYANATP GVEKAKRAVK CDMCSGIEGG PSCVRACPTG AAIRVAPEEF LTVARLQRDD A
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