| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0582 |
|---|
| Symbol | |
|---|
| ID | 5200413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 631644 |
|---|
| End bp | 632264 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640580125 |
|---|
| Product | GTP cyclohydrolase |
|---|
| Protein accession | YP_001261088 |
|---|
| Protein GI | 148553506 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0302] GTP cyclohydrolase I |
|---|
| TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.931041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATAC TCGGTGACGA TGACGAGGCG CTGCACGGGA CGCCCAAGGG GAAGATCGCG
GTGCCGGAGC ACGTGCAGGA GGCGATCCGC ACCCTGATCC GCTGGTCGGG CGACAATCCC
GACCGGGAGG GCCTGCTCGA TACGCCGTCG CGGGTCGGCC GCGCCTGGAA GGAATATTGC
CAAGGCTATG ACGAGGACCC CTCGGTCCAT CTCAGCCGGA CCTTCGAGGA GGTCGGCGGC
TATGACGAGA TCGTCCTGCT GCGCGACATC CCGTTCCAGT CGCATTGCGA GCATCACATG
GCGCCGATCA TCGGCCATGC GCATATCGCC TATCTGCCGC ACAGCCGGGT GGTCGGCATC
TCGAAGCTGG CGCGGGTGCT GCACGGCTTC GCCCGCCGCT TGCAGATACA GGAGCGGCTG
ACCGCCGAGA TCGCGGACTG CATCTGGACG AATCTGGAGC CGCTCGGCGT CGCCGTCGTC
ATCCACGCGA CCCATGCCTG CATGACGGCG CGCGGCGTTC GCACGCCCGG TGTCGGGATG
ACGACGAGCC GCATGATGGG CGTCTTCCGC GACGACGATC GAAGCCGTAA GGAGGTACTG
AGCCTGATGG GGCTCGGCTG A
|
|---|
| Protein sequence | MSILGDDDEA LHGTPKGKIA VPEHVQEAIR TLIRWSGDNP DREGLLDTPS RVGRAWKEYC
QGYDEDPSVH LSRTFEEVGG YDEIVLLRDI PFQSHCEHHM APIIGHAHIA YLPHSRVVGI
SKLARVLHGF ARRLQIQERL TAEIADCIWT NLEPLGVAVV IHATHACMTA RGVRTPGVGM
TTSRMMGVFR DDDRSRKEVL SLMGLG
|
|---|
| |