Gene Swit_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0577 
Symbol 
ID5200457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp626968 
End bp627342 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content70% 
IMG OID640580120 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_001261083 
Protein GI148553501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0658515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGG ATCGTGAACA GGGCAGCGCG CTCGACCCGC GCTACGACGC CGCCGGCCTC 
GTCACCGCCG TGGTGACCGA CCATCGTTCG GGCGAGGTGC TGATGCTCGC CCATATGAAC
GCCGAGGCGC TCGCCGCGAC CCTGGAGAGC GGGGAGGCGA CCTTTTTCTC GCGCTCGCGC
GGGCGGTTGT GGAAGAAGGG CGAGAGCAGC GGCAACGTCA TGCGCGTCGT CGAGGCGCGG
ATCGATTGCG ACCAGGACGC CATCTGGCTG CGCTGCGAGC CGGCGGGGCC GGCATGCCAC
ACCGGCGAGC GGAGCTGCTT CTATCGCCGG ATCGACCGCG ACGGCCCGAC CCTGGTGCGG
ACCATCGAGG TTTAG
 
Protein sequence
MDQDREQGSA LDPRYDAAGL VTAVVTDHRS GEVLMLAHMN AEALAATLES GEATFFSRSR 
GRLWKKGESS GNVMRVVEAR IDCDQDAIWL RCEPAGPACH TGERSCFYRR IDRDGPTLVR
TIEV