| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0567 |
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| Symbol | rph |
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| ID | 5200654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 618733 |
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| End bp | 619449 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580110 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001261073 |
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| Protein GI | 148553491 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.444446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAT CCGGCCGCGC CCCCGATCAG ATGCGGGCGA TCAGCATCGA AACCGGTTTC
ACCGTCCACG CCGAAGGCTC CGTGCTGATC AGCTTCGGCG ACACCCGCGT CCTCGTCACC
GCCTCGGTCG AGGAGAAGGT TCCGCCCTTC CTGCGCGGCA AGGGCCAGGG CTGGGTCACC
GCCGAATATG GCATGCTGCC CCGCGCCACC CATACCCGCG GCAGCCGCGA GGCGGCCAAG
GGCAAGCAGT CCGGCCGCAC CCAGGAGATC CAGCGCCTGA TCGGCCGCTC GCTCCGCGCG
GTGGTCGACA TGGCGAAGCT CGGCGAGCGC CAGATCGTGA TCGACTGCGA CGTGCTCCAG
GCCGACGGCG GCACCCGCAC CGCCTCGATC TCGGGCGGCT GGGTGGCCCT GCGCCTCGCG
GTCGACAAGC TGCTCGCCTC GGGCGCGATC GCCGAGGACC CGATCACCGC GCAGGTCGCG
GCGATCTCCT GCGGCATCCA TGAGGGAACG CCGGTGCTCG ACCTCGACTA TATCGAGGAT
TCGAACGCCC ATGCCGACGC CAATTTCGTG CTGCTCGACA ATGGCAACAT CGCCGAGGCG
CAGGCGACCG CGGAAGGAGC GACCTATGAC GAGGAAGCCT TGCTGAGGCT GCTCCGCCTC
GCCCGCATCG GCTGCGGCGA GATCTTCGCC GCGCAGCGCA AGGCGACCGG ACGGTGA
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| Protein sequence | MRPSGRAPDQ MRAISIETGF TVHAEGSVLI SFGDTRVLVT ASVEEKVPPF LRGKGQGWVT
AEYGMLPRAT HTRGSREAAK GKQSGRTQEI QRLIGRSLRA VVDMAKLGER QIVIDCDVLQ
ADGGTRTASI SGGWVALRLA VDKLLASGAI AEDPITAQVA AISCGIHEGT PVLDLDYIED
SNAHADANFV LLDNGNIAEA QATAEGATYD EEALLRLLRL ARIGCGEIFA AQRKATGR
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