| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0549 |
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| Symbol | |
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| ID | 5200692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 603195 |
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| End bp | 603839 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580091 |
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| Product | DNA-N1-methyladenine dioxygenase |
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| Protein accession | YP_001261055 |
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| Protein GI | 148553473 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3145] Alkylated DNA repair protein |
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| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGATC TGTTCGATGG GGAGGCGGAA CCTCCCGTGG TGACCATGGC GGCCGGCGCG
GTCCTGCTGC GCGGGTTCGC GCGGCCCTAT GAAGCCGAAC TGCTTGCCGC GCTTCGGGAC
GTCCTCGCGA TTTCGCCCTT CCGGCACATG ACCACGCCCG GCGGCCATGT CATGTCGGTC
GCCATGACCA ATTGCGGCGC GGCCGGCTGG CTCACTGACC GCTCCGGCTA TCGCTATGAC
GGGATCGACC CGAAGACGGC TTCGCCCTGG CCCGCCATGC CCGATTGCTT CGCGGCGCTT
GCCCGCGCCG CGGCGGAAGC CGCCGGCCAT GGCGGGTTCC AGCCGGACGC CTGCCTCATC
AACCGCTACA TCCCCGGCGC GCGCCTCTCG CTCCATCAGG ATCGCAACGA GCGGGATGTC
GCGCACCCGA TCATATCGGT CTCGCTCGGG CTGCCGGCGA CCTTCCTGTT CGGCGGAGCG
AGACGGTACG ACAGGCCCCG GAGATTTGCG CTGGAGCACT GCGATATCGC GGCCTGGGGC
GGCCCGTCGC GCCTGCATTT CCACGGCGTC GCGGAACTGA AGGACGGCGA GCACGATATG
CTCGGACGAC AGCGCATCAA CCTGACCTTC CGGAAAGCAC TGTGA
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| Protein sequence | MRDLFDGEAE PPVVTMAAGA VLLRGFARPY EAELLAALRD VLAISPFRHM TTPGGHVMSV
AMTNCGAAGW LTDRSGYRYD GIDPKTASPW PAMPDCFAAL ARAAAEAAGH GGFQPDACLI
NRYIPGARLS LHQDRNERDV AHPIISVSLG LPATFLFGGA RRYDRPRRFA LEHCDIAAWG
GPSRLHFHGV AELKDGEHDM LGRQRINLTF RKAL
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