| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0540 |
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| Symbol | |
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| ID | 5200577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 591692 |
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| End bp | 593791 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640580081 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001261046 |
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| Protein GI | 148553464 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTCA AGGGTCGGTT GTCCTTCTCC ATTTCCATGT TCGCGCTGAT GGCCTCGCCG
GCCTTCGCCG ACGAACGGGA CAACGACTAT CACCGCCCCG AATCCGCCGA CATCATCGTC
ACCGCGCCGC TCCAGCGCGA CCGGATGGAC GTGCTGGCGG GCACCTCGGT GCTGACCGGC
GCGCAGCTCA CCACGGCGCT GCGCCCGACG ATCGGCGAGA CGATCGAGCA TACGCCGGGC
GTCTCGGCCA CCTCCTTCGG CCCCAACGCG TCGCGCCCGA TCCTGCGCGG CCTGCAGGGC
GAGCGGGTCC GGGTGCTGAC CGACGGGATC GGCTCGGTCG ACGTGTCGAA CACCAGCGTC
GACCATGCCG TCGCGATCAA CCCGCTGCTC GCCGAGCGGA TCGAGGTGCT GCGCGGGCCG
GAGGCGCTGC TCTACGGATC GGCCGCGATC GGCGGCGTCG TCAACGTGAT CGACAAGCGC
ATCCCGCGCG CCATCCCCGA CGAGCCCGTC CATGTCGACG CGATCCTGAC CTATGGCAGC
GCCGCCAACG AGCGCTCGGG CGGCGCCGCG CTCGACGCGC CGATCGGCGG CGGCTTCGTC
GCGCACCTCG ACGGCAGCTA CCAGAAGACC GGCAACCTGC GGATCGGGGG CTATGCGCTG
AGCCCCGCCG CCCGCGCGCA GGCGCTCGCC TCGGCGCAGC TTCCTGCCGA CCCGGACGAG
GAGATCGATT TCGCCGCCAA CGCCGCGGTC AAGGGCAAGC TGCCCAACAG CCAGTCGGAG
ACCTGGGTCG CCGGCGGCGG CCTGTCCTAT ATCGACGGGG ACAGCCATTA CGGCATCGCC
TACAGCCATT ATGACAGCCG CTACGGCGTG CCGATCCGCT TCGCCACCGA GCCGGGCCAG
GAGCAGGAGG CGCCGCGCAT CGACCTCGTC CAGAACCGCT TCGACGCGCG CGCGGAGATC
GCCGCCGGCG GATCGGTGAT CCAGACCATC CGCGCCCGGC TCGCCTACGC CAAATATCGC
CATTTCGAGC TGGAGGAGGA CGGCTCGGTC GGCACCGCCT TCTACAATAA CGGCTTCGAA
GGCCGGGTCG AGCTGGTCCA GGCCGATCAT GGCGCGTGGC ATGGCGCGAC CGGCGCGCAG
TTCTTCATCC GCGACTTCAA CGTCGTCGGC GACGAAGCCT TCCTGCCGCG CAACCAGACC
CAGCAGATCG GCCTCTTCAC CCTCCAGCAG CTCGACTATG GCGTGGTGAA GCTCGAAGGC
GGGCTGCGCT ACGAGAAGAG CTGGCTGTCG GCCAACCCGT TCGAGGACCA GCCGCAATTC
CCCAAGGGCA GCCGCAACTT CGACACGCTG TCGGGATCGA TCGGCGCCTC CTACCGGGTG
ACCGACGACT GGCGGCTGGG CGTCAACCTG TCGCGCACCG AACGCGCGCC GGCCGCCGAG
GAGCTGTTCG CCAACGGCCC GCACGCGGGC ACCGAGGCGT TCGAGATCGG CAGCCCGGAT
TTCAAGACCG AACGGAGCTG GGGCCTCGAA GGCGTGCTGC ACGGCAAGGG CCCGGGCTTC
ACCATCCACG CGTCGATCTA TCACAACTGG TTCGACAACT TCATCTACGA CAGCCCGGAC
GGTACGCTGG AAGACGGCCT GCCCGTGTTC CGCTACGCCC AGGCCAAGGC CCGCTTCTAC
GGCGCGGAGC TCGAGGCGAC CGCCGATCTC GCCCAGCTCG GCGGCTTCGC GATCAAGGCC
GACGCGCTAG GCGATTTCGT CCATGCGAAG ATCACCGGCT TCGGTCCCGC CCCGCGTATC
CCCCCGCTGC GCCTGCTGGG CGGCCTGAGC GCCGAAAGCG CCAGGGTCGA CGGCCGGGTC
GAGGTCGAAT GGACCGACAA GGCGCAGCGA CTCGCCAGCT TCGAGACGCC GACCGCCGGC
TACACGCTGG TCAACGCCTC GCTGACCCTG CGCCCGTTCG CCGACCGGCC GGAGACCAGC
ATCGTGCTGG CCGCGCACAA TATCTTCGAC GTCAACGCCC GCCGCCATGC GAGCTACCTC
AAGGACTTCG CCCCGCTCGC CGGCCGCGAC TTCCGCGTCA CCGCGCGAGT GGGCTTCTAG
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| Protein sequence | MSFKGRLSFS ISMFALMASP AFADERDNDY HRPESADIIV TAPLQRDRMD VLAGTSVLTG
AQLTTALRPT IGETIEHTPG VSATSFGPNA SRPILRGLQG ERVRVLTDGI GSVDVSNTSV
DHAVAINPLL AERIEVLRGP EALLYGSAAI GGVVNVIDKR IPRAIPDEPV HVDAILTYGS
AANERSGGAA LDAPIGGGFV AHLDGSYQKT GNLRIGGYAL SPAARAQALA SAQLPADPDE
EIDFAANAAV KGKLPNSQSE TWVAGGGLSY IDGDSHYGIA YSHYDSRYGV PIRFATEPGQ
EQEAPRIDLV QNRFDARAEI AAGGSVIQTI RARLAYAKYR HFELEEDGSV GTAFYNNGFE
GRVELVQADH GAWHGATGAQ FFIRDFNVVG DEAFLPRNQT QQIGLFTLQQ LDYGVVKLEG
GLRYEKSWLS ANPFEDQPQF PKGSRNFDTL SGSIGASYRV TDDWRLGVNL SRTERAPAAE
ELFANGPHAG TEAFEIGSPD FKTERSWGLE GVLHGKGPGF TIHASIYHNW FDNFIYDSPD
GTLEDGLPVF RYAQAKARFY GAELEATADL AQLGGFAIKA DALGDFVHAK ITGFGPAPRI
PPLRLLGGLS AESARVDGRV EVEWTDKAQR LASFETPTAG YTLVNASLTL RPFADRPETS
IVLAAHNIFD VNARRHASYL KDFAPLAGRD FRVTARVGF
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