Gene Swit_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0539 
Symbol 
ID5200576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp589862 
End bp591493 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content69% 
IMG OID640580080 
Productphosphoglucomutase 
Protein accessionYP_001261045 
Protein GI148553463 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0844914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GTGAGGTCGC CACAACGCCC TTCCCCGACC AGAAGCCCGG CACATCGGGG 
CTTCGCAAGA AGGTCCCCGT CTTCCAGCAG CCCGGCTATG CCGAGAACTT CATCCAGTCG
ATCTTCGACT CGCTCGAAGG CTTCGCCGGC CGGGCGCTGG TGATCGGCGG CGACGGCCGC
TACCACAACC GCGCGGTGAT CCAGACGGCG ATCCGCATGG CGGCCGCCAA CGGCTTCGGC
ACGATCCTGG TCGGGCGCGG CGGCATATTG TCGACCCCGG CCGCCAGCCA TCTCATCCGC
CTCCATGGCG CGTTCGGCGG GATCATCCTG TCGGCCAGCC ACAATCCCGG CGGCCCGACC
GAGGATTTCG GGATCAAGTA CAATATCGCC AATGGCGGCC CCGCGCCCGA GCGGAACACC
GACGCGATCT TCGCCCGCAG CAGGACGATC GATCGCTATC GGACGCTCGA CACGCCCGAC
GTCGATCTCG ATCGCGACGG CGAGACGCGG GTCGGCGACG CGGTCGTCCG GATCATCGAT
CCGGTCGCCG ACTATGCCGC GCTGATGGAG GCGTTGTTCG ACTTCGCCGC GATCCGCGAC
CTGATCGGAT CGGGCTTCCG CATCGCCTTC GACGCGATGA GCGCGGTGAC CGGCCCCTAT
GCGATCGAGA TCCTCGAACA TCGGCTCGGC GCGGCGAAGG GGACGGTGCG CAACGGCGTC
CCCCTGCCCG ACTTCGGCGG CCATCATCCC GATCCCAACC TGGTCCACGC CCGCGCGCTG
TACGAGGAGA TGATGGGCCT CGACGCGCCC GATTTCGGCG CTGCCTCCGA CGGCGACGGC
GATCGCAACC TGATCATCGG CAAGGGCATC TTCGTCACGC CGTCGGATTC GCTCGCGATG
CTGGCGGCCA ACGCCCATCT CGCCCCCGGC TATGCCCGCG GCCTCGCCGG CATCGCCCGG
TCGATGCCGA CCAGCGGCGC CGCCGACCGG GTCGCCGAAG CGCTGGGCAT CCCGCTGTTC
GAAACGCCGA CCGGCTGGAA ATTCTTCGGC AACCTGCTCG ACGCCGGCCA GGCGACGATC
TGCGGCGAGG AGAGCGCCGG CACCGGATCG GACCATGTCC GCGAGAAGGA CGGGCTGTGG
GCGGTGCTGC TCTGGCTCAA CATCCTCGCG GCGCGCCGCG AGGGCGTGCA GGCGATCGCC
GCCGGGCATT GGGCGCGTTT CGGGCGCAAC TATTATGCCC GCCATGATTA TGAGGACGTC
GACACCGCCG CCGCCGACGC GGTGATCGCG GACCTGCGCG GCCGTCTCGC CAACCTGCCC
GGCACGACGA TCGGCGCGCT CGGGATCGAG GCGGCCGACG ACTTCGCCTA TCATGATCCG
GTCGACGGCT CGCAGAGCCA CGGCCAGGGC ATCCGCATCC TGTTCGAGGG CGGATCGCGC
ATCGTCTTCC GCCTGTCGGG AACCGGCACA TCGGGCGCGA CGATCCGCGT CTATATCGAG
CGCTACGAAC CCGCCGGCGG CAACCTCGGC CGCGCGACCG GCGATGCCAT CGCCGATCTG
GTCGTCGCCG CCGAGACGAT CGCCGGCATC GCCCGCCACA CCGGCCGGAC CGCGCCGGAC
GTGATCACCT GA
 
Protein sequence
MTIREVATTP FPDQKPGTSG LRKKVPVFQQ PGYAENFIQS IFDSLEGFAG RALVIGGDGR 
YHNRAVIQTA IRMAAANGFG TILVGRGGIL STPAASHLIR LHGAFGGIIL SASHNPGGPT
EDFGIKYNIA NGGPAPERNT DAIFARSRTI DRYRTLDTPD VDLDRDGETR VGDAVVRIID
PVADYAALME ALFDFAAIRD LIGSGFRIAF DAMSAVTGPY AIEILEHRLG AAKGTVRNGV
PLPDFGGHHP DPNLVHARAL YEEMMGLDAP DFGAASDGDG DRNLIIGKGI FVTPSDSLAM
LAANAHLAPG YARGLAGIAR SMPTSGAADR VAEALGIPLF ETPTGWKFFG NLLDAGQATI
CGEESAGTGS DHVREKDGLW AVLLWLNILA ARREGVQAIA AGHWARFGRN YYARHDYEDV
DTAAADAVIA DLRGRLANLP GTTIGALGIE AADDFAYHDP VDGSQSHGQG IRILFEGGSR
IVFRLSGTGT SGATIRVYIE RYEPAGGNLG RATGDAIADL VVAAETIAGI ARHTGRTAPD
VIT