| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0538 |
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| Symbol | |
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| ID | 5200575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 588481 |
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| End bp | 589779 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640580079 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001261044 |
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| Protein GI | 148553462 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0332131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC TGGTCGTGCA GCGGCTTTCA TTTGCGCTTC GGGCCCGATC GGGGCAGTCT
GCTGACAGCG ATGTTCGCGG CGGCGGCCGC GTGAAGGAAT GCCGGACGAT GACCTTGCGT
GTCGTGAAGG AAGTGGGGTC GGCGATCGAT CCCGATGCGA ATTTCGGCCT GCCGGGCTGG
ATCTACCATG ATCCGGAGAT ATTCGCGCTG GAGCAGGAGC GGATCTTCCG CCGGTCGTGG
CAGCTCGTCT GCCATCTCAA CGACATTCCG GCCAGGGGCG ACTGGCAGTC GCTGGAGATC
GGCCATGAGG CGATCATCGT CGTGCGCGGC GAGGATGGCG AGGTGCGGGC GCTGTCCAAC
ACCTGCCGTC ACCGCGCGTC GCGACTGGTC GACGGTGCCG AGGGCTGCGC CAGGAAACTG
ATCTGTCCCT ATCACGCCTG GACCTACGAG CTGGACGGCC GGCTGTCGGG GGTGCCCGGC
AAGCGCGACT ATCCCGCCTT CGACATGGCC GATTACGGCC TCCACAGTTT CCCGGTCGAG
GTTTGGCGCG GCTTCATCTT CGTCAACATC GAAGGCGAGG GGCCTTCGGT CGCCGAGATG
ATGGCTCCCT ATGAGGAGGA GGTCGCGCCC TATCGCTTCG AGGAGATGAA GGCGCTCGGC
CGCGTCGTGA TGCGCCCGCG CACCGTCAAC TGGAAGAACA TCGCCGACAA TTATTCGGAC
GGCCTGCATA TCCCGGTCGC GCATCCGGGG CTCAAGCGGC TGTTCGGTCC CGGCTACGGC
ATCGAGGCGA AAGCCTGGGC CGACAAGATG TGGGGGCCGT TGCTCGAAGG CGTGCCGGGC
AGTTCGTCCG AGGCGCTCTA TCGCAAATAT CTGCCGCAGG TGGCGCATCT GCCCGCCGAC
CGGCAGCGGC TGTGGATCTA TTTCAAGCTG TGGCCGAACA CGGCGTTCGA CATCTATCCC
GACCAGATCG ACTTCATGCA GTTCATCCCC GTCTCGCCGA CCGAGACGAT GATCCGCGAG
ATCGCCTATG TCCTGCCCGA CGAGCGGCGC GAGATGAAGG CGGCGCGCTA CCTCAACTGG
CGGATCAACC GCATGGTCAA TGCCGAGGAC ACGAAGCTGG TCGCGCGGGT GCAGGACGGC
ATGGCGACGC AGAGCTATAC GCAAGGCCCG CTCGGCACCG GCGAGGTCTG CCTCAGGAGC
TTCGCCCGCA AGATGCGCAC GCTGATCCCG GAGACGCGCC TGCCGACCCG CCCGCCCGCG
GGCTGGAGCA CGAAGAGCGT CGCGGGGCGC CTCGCATGA
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| Protein sequence | MARLVVQRLS FALRARSGQS ADSDVRGGGR VKECRTMTLR VVKEVGSAID PDANFGLPGW
IYHDPEIFAL EQERIFRRSW QLVCHLNDIP ARGDWQSLEI GHEAIIVVRG EDGEVRALSN
TCRHRASRLV DGAEGCARKL ICPYHAWTYE LDGRLSGVPG KRDYPAFDMA DYGLHSFPVE
VWRGFIFVNI EGEGPSVAEM MAPYEEEVAP YRFEEMKALG RVVMRPRTVN WKNIADNYSD
GLHIPVAHPG LKRLFGPGYG IEAKAWADKM WGPLLEGVPG SSSEALYRKY LPQVAHLPAD
RQRLWIYFKL WPNTAFDIYP DQIDFMQFIP VSPTETMIRE IAYVLPDERR EMKAARYLNW
RINRMVNAED TKLVARVQDG MATQSYTQGP LGTGEVCLRS FARKMRTLIP ETRLPTRPPA
GWSTKSVAGR LA
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