Gene Swit_0537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0537 
Symbol 
ID5200574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp586883 
End bp588484 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content70% 
IMG OID640580078 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001261043 
Protein GI148553461 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0939614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GGCAGGACGT CGTCATCATC GGCGGCGGGC ATAACGGCCT CGTCTGCGCC 
TTCTACCTGG CGGTGCGCGG GCTCAAGGTC CGCGTGCTCG AACGGCGCAA GGTCGTCGGC
GGCGCGGCGG TGACCGAGGA ATTCCACCCC GGCTTCCGCA ATTCGGTGGC GAGCTACACG
GTCAGCCTGC TCCAGCCGCG CGTGATCGCC GACATGAAGC TGCACGAGCG CGGCCTCAGG
ATCGTCGAGC GGCCGATCTC CAACTTCCTG CCGCTCCAGG ACGGCGGCTA TCTCAAGCTC
GGCGGCGGAT TGGAGCGCAC CCAGGCCGAG TTCCGGCGCT TCTCCGCCCG CGATGCCGAG
ACGCTGCCCG CTTATTACGA CGCGCTCGAC GGCGTCGCCG ACGTGCTGCG CGACCTGGCG
CTCCGGATAC CGCCCAATGC GGGCGGCGGC ATCGCCGAAC TGTTCAAGGC CGCGTCGCAG
GGGCGCAGGA TCGCGATGGC GGGCCTGCCG GCGCAGCGCG ACATGCTCGA CCTGTTCGTG
AAGAGCGCGC GGACCTTTCT CGACGGCTGG TTCGAGCATG ACGCGATCAA GGCCGCCTTC
GGCTTCGACG CGGTGGTCGG CAACTATGCT AGCCCCGACA CGCCCGGCTC GGCCTATGTC
CTGCTCCACC ACGTCTTCGG CGAGGTGAAC GGCAAGAAGG GCGCCTGGGG CCATGCGATC
GGCGGGATGG GCGCGATCAC CCAGGCGATG AAGGCCGCCT GCGAGGACTA TGGCGTCGTC
ATCGAGACCG ACACGGCGGT CGAGAAGGTG CTGGTCGACA ACGGCCGCGC GGTCGGCGTC
CGCACCGGGG ACGGGGTCGA GCACATGGCC CGCGCGGTGG CGTCGAACGT CGGGCCGGGG
CTGCTCTATC GCAAGCTGGT CGACCAGGCC GATCTCGACG CCGATTTCAA GCGGCGGATG
AAGGGGTTCA AGGCCGGGTC GGGCACCTTC CGGATGAACG TCGCCCTGTC CGAACTGCCC
AGCTTCTCGG CGCTGCCGGG GGAGGGCGAG CATCACCGCA GCGGCATCAT CATCGCGCCG
ACGCTCGACT ATATGGACCG CGCCTTCACC GATGCGCGCG CGCATGGCTG GTCGAAGCAG
CCGATCGTCG AGATGCTGAT CCCGTCGACC GTCGACGACA GCCTCGCGCC GAAGGGCCAG
CATGTCGCCA GCCTGTTCTG CCAGCAATTC GCGCCCGAGC TTCCCGACGG CCGGAGCTGG
GACGACGAGC GCGAGGCGGC GGCCGACCAC ATCATCGCCA CCGTCGACGC CCATGCGCCC
GGCTTCGCCC GATCGGTGCT GGGGCGGCAG ATATTGTCGC CGCTCGACCT CGAACGGACC
TTCGGGCTGG TCGGCGGCGA CATCATGCAT GGGCACATGT CGCTCGATCA GCTCTGGTCG
GCGCGGCCGA TCCTCGGCCA TGGCGACTAT CGCGCGCCGG TCAAGGGACT CTACATGTGC
GGCGCGGGCA GCCATCCCGG CGGCGGCGTG ACCGGCGCCC CCGGTCACAA CGCCGCCCAG
GCGATCCTCG CCGATCGCGG GCTGGGGCGC TTCTTCGGCT GA
 
Protein sequence
MTTRQDVVII GGGHNGLVCA FYLAVRGLKV RVLERRKVVG GAAVTEEFHP GFRNSVASYT 
VSLLQPRVIA DMKLHERGLR IVERPISNFL PLQDGGYLKL GGGLERTQAE FRRFSARDAE
TLPAYYDALD GVADVLRDLA LRIPPNAGGG IAELFKAASQ GRRIAMAGLP AQRDMLDLFV
KSARTFLDGW FEHDAIKAAF GFDAVVGNYA SPDTPGSAYV LLHHVFGEVN GKKGAWGHAI
GGMGAITQAM KAACEDYGVV IETDTAVEKV LVDNGRAVGV RTGDGVEHMA RAVASNVGPG
LLYRKLVDQA DLDADFKRRM KGFKAGSGTF RMNVALSELP SFSALPGEGE HHRSGIIIAP
TLDYMDRAFT DARAHGWSKQ PIVEMLIPST VDDSLAPKGQ HVASLFCQQF APELPDGRSW
DDEREAAADH IIATVDAHAP GFARSVLGRQ ILSPLDLERT FGLVGGDIMH GHMSLDQLWS
ARPILGHGDY RAPVKGLYMC GAGSHPGGGV TGAPGHNAAQ AILADRGLGR FFG