Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0537 |
Symbol | |
ID | 5200574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 586883 |
End bp | 588484 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580078 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001261043 |
Protein GI | 148553461 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0939614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC GGCAGGACGT CGTCATCATC GGCGGCGGGC ATAACGGCCT CGTCTGCGCC TTCTACCTGG CGGTGCGCGG GCTCAAGGTC CGCGTGCTCG AACGGCGCAA GGTCGTCGGC GGCGCGGCGG TGACCGAGGA ATTCCACCCC GGCTTCCGCA ATTCGGTGGC GAGCTACACG GTCAGCCTGC TCCAGCCGCG CGTGATCGCC GACATGAAGC TGCACGAGCG CGGCCTCAGG ATCGTCGAGC GGCCGATCTC CAACTTCCTG CCGCTCCAGG ACGGCGGCTA TCTCAAGCTC GGCGGCGGAT TGGAGCGCAC CCAGGCCGAG TTCCGGCGCT TCTCCGCCCG CGATGCCGAG ACGCTGCCCG CTTATTACGA CGCGCTCGAC GGCGTCGCCG ACGTGCTGCG CGACCTGGCG CTCCGGATAC CGCCCAATGC GGGCGGCGGC ATCGCCGAAC TGTTCAAGGC CGCGTCGCAG GGGCGCAGGA TCGCGATGGC GGGCCTGCCG GCGCAGCGCG ACATGCTCGA CCTGTTCGTG AAGAGCGCGC GGACCTTTCT CGACGGCTGG TTCGAGCATG ACGCGATCAA GGCCGCCTTC GGCTTCGACG CGGTGGTCGG CAACTATGCT AGCCCCGACA CGCCCGGCTC GGCCTATGTC CTGCTCCACC ACGTCTTCGG CGAGGTGAAC GGCAAGAAGG GCGCCTGGGG CCATGCGATC GGCGGGATGG GCGCGATCAC CCAGGCGATG AAGGCCGCCT GCGAGGACTA TGGCGTCGTC ATCGAGACCG ACACGGCGGT CGAGAAGGTG CTGGTCGACA ACGGCCGCGC GGTCGGCGTC CGCACCGGGG ACGGGGTCGA GCACATGGCC CGCGCGGTGG CGTCGAACGT CGGGCCGGGG CTGCTCTATC GCAAGCTGGT CGACCAGGCC GATCTCGACG CCGATTTCAA GCGGCGGATG AAGGGGTTCA AGGCCGGGTC GGGCACCTTC CGGATGAACG TCGCCCTGTC CGAACTGCCC AGCTTCTCGG CGCTGCCGGG GGAGGGCGAG CATCACCGCA GCGGCATCAT CATCGCGCCG ACGCTCGACT ATATGGACCG CGCCTTCACC GATGCGCGCG CGCATGGCTG GTCGAAGCAG CCGATCGTCG AGATGCTGAT CCCGTCGACC GTCGACGACA GCCTCGCGCC GAAGGGCCAG CATGTCGCCA GCCTGTTCTG CCAGCAATTC GCGCCCGAGC TTCCCGACGG CCGGAGCTGG GACGACGAGC GCGAGGCGGC GGCCGACCAC ATCATCGCCA CCGTCGACGC CCATGCGCCC GGCTTCGCCC GATCGGTGCT GGGGCGGCAG ATATTGTCGC CGCTCGACCT CGAACGGACC TTCGGGCTGG TCGGCGGCGA CATCATGCAT GGGCACATGT CGCTCGATCA GCTCTGGTCG GCGCGGCCGA TCCTCGGCCA TGGCGACTAT CGCGCGCCGG TCAAGGGACT CTACATGTGC GGCGCGGGCA GCCATCCCGG CGGCGGCGTG ACCGGCGCCC CCGGTCACAA CGCCGCCCAG GCGATCCTCG CCGATCGCGG GCTGGGGCGC TTCTTCGGCT GA
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Protein sequence | MTTRQDVVII GGGHNGLVCA FYLAVRGLKV RVLERRKVVG GAAVTEEFHP GFRNSVASYT VSLLQPRVIA DMKLHERGLR IVERPISNFL PLQDGGYLKL GGGLERTQAE FRRFSARDAE TLPAYYDALD GVADVLRDLA LRIPPNAGGG IAELFKAASQ GRRIAMAGLP AQRDMLDLFV KSARTFLDGW FEHDAIKAAF GFDAVVGNYA SPDTPGSAYV LLHHVFGEVN GKKGAWGHAI GGMGAITQAM KAACEDYGVV IETDTAVEKV LVDNGRAVGV RTGDGVEHMA RAVASNVGPG LLYRKLVDQA DLDADFKRRM KGFKAGSGTF RMNVALSELP SFSALPGEGE HHRSGIIIAP TLDYMDRAFT DARAHGWSKQ PIVEMLIPST VDDSLAPKGQ HVASLFCQQF APELPDGRSW DDEREAAADH IIATVDAHAP GFARSVLGRQ ILSPLDLERT FGLVGGDIMH GHMSLDQLWS ARPILGHGDY RAPVKGLYMC GAGSHPGGGV TGAPGHNAAQ AILADRGLGR FFG
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