| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0534 |
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| Symbol | |
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| ID | 5200661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 581358 |
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| End bp | 583079 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580075 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001261040 |
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| Protein GI | 148553458 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTCAG GCGGACACGC ACCGACGGAT ATCCTCCACA CGGCGTCGAG CCATGCCTAT
GATCTGCTGC CCGGACAGCT CGCCACGGAA GCCGAGACGG CGCGCGCGCT GGCCGCGGCG
GCCAAGGACC CTCGCCTCGC CCGCGCCGGC CATGCCCTCG TCACCGGCCG GATATCGGAG
GCCGAGACAC TGCTCCGCCA GGCGCTGCGC GACGATCCGT TCGACATCGC CGCGATCCGC
ATGCTCGCCG AGGTCGCCGG CCGGATCGGC CGCTATCGCG ACGCCGAGGC GCTGCTCCGC
CGCGCGCTCG AACTGGCGCC GGAGTTCGAG GGCGCGCGCC ACAACCTCGC GCTGGTGCTG
GTCCGCCAGA CCCGCCACGC CGACGCGCTG GTCGAGATCG AACGGCTGCT CGACCGCAAC
CCCGCCGATC GCGCCGCGCG CAACCTCAAG GCCGCCGCGC TCGGCCAGAT CGGCGAGCAT
GAGGCGTCGA TCGCGCTCTA CGAGGAACTG ATCGCCGAAC AGGACGGCCA TCCCTGGTTG
TGGATGAGCT ACGGCCACGG CCTCAAGACG ATCGGCCGGA CGGCCGAGGC GATCGTCGCT
TACCGTCGCG CGGTGGAACT GAGGCCCGAG ACCGGCGAAG CCTGGTGGAG CCTCGCCAAC
CTCAAGACCT TCCGCTTCGC CGACGCCGAT GTCTCGGCGA TGGAACGGGC GCGGGCCGGC
GACGGGCTGT CGATCGACGA CCGCGCCCAG ATCGGCTTCG CGCTCGGCAA GGCGCGCGAG
GATCGCGGCG AGGACGACGA GGCGTTCGAC CGCTATGCCG AGGCCAATGC GATGCGTCGC
CGCATGGTCC CCTATCATGC CGGCGACAAT GTCGAACATG TCGACCGCTC GGCCGCCTTC
TTCGACGCGG CCTTCTTCGC GGAGCGCGCG GGATGGGGCT GTCCCGACCC CGCCCCGATC
TTCGTGCTCG GCATGCCGCG TTCGGGATCG ACGCTGGTCG AGCAGATATT GTCGAGCCAT
CCCGAGGTCG AAGGCACGGG CGAGCTGCAC GACATCGGCC AGATCGCCCG GCGGCTGAGC
GGCCATAGCC GCCGCGACCA GCGCTCGCCC TATCCCGAAG CCCTGGCCGA CCTGTCGGCC
GCCGATGTCC GCGCGCTGGG CGAGGACTAT CTCGCGCGCA CCCGCGTCCA CCGCCACAGC
GATCGGCCGC GCTTCATCGA CAAGATGCCC AACAACTGGG CGCATGTCGG GCTGATCCGG
CTGATCCTGC CCAACGCCAC GATCATCGAC ACGCGGCGGC ATCCGATCGG CTGCTGCTGG
TCGGTGTTCA AGCAGAATTT CGCCCGCGGC CAGGCCTATA GCTACGACCT CGCCGATCTC
GGCGGCTATT ATGCCGACTA TGTCCGCGCG ATGGCGGCGT TCGACGCCGC GCAGCCCGGC
GCCGTCCACC GCGTCTTCTA CGAGGCGATG GTCGACGATC CCGAAGCGGG GATTCGCGCC
CTGCTCGCCG CCGCCGGCCT CGCCTTCGAT CCCGCCTGCC TGGCCTTCCA CGCGACCGAG
CGAGCGGTGC GGACGCCGAG CTCCGAACAG GTGCGCCGCC CGATCTTCCG CGATGCCGTC
GACCATTGGC AGCGCTTCGA GCACCGGCTC TCGCCGCTGG TCGAAGCGCT CGGCAGCGCG
CTTTCCGATT ATCCGAGCAT GAAGAGCACA GAGGACGCCT GA
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| Protein sequence | MGSGGHAPTD ILHTASSHAY DLLPGQLATE AETARALAAA AKDPRLARAG HALVTGRISE
AETLLRQALR DDPFDIAAIR MLAEVAGRIG RYRDAEALLR RALELAPEFE GARHNLALVL
VRQTRHADAL VEIERLLDRN PADRAARNLK AAALGQIGEH EASIALYEEL IAEQDGHPWL
WMSYGHGLKT IGRTAEAIVA YRRAVELRPE TGEAWWSLAN LKTFRFADAD VSAMERARAG
DGLSIDDRAQ IGFALGKARE DRGEDDEAFD RYAEANAMRR RMVPYHAGDN VEHVDRSAAF
FDAAFFAERA GWGCPDPAPI FVLGMPRSGS TLVEQILSSH PEVEGTGELH DIGQIARRLS
GHSRRDQRSP YPEALADLSA ADVRALGEDY LARTRVHRHS DRPRFIDKMP NNWAHVGLIR
LILPNATIID TRRHPIGCCW SVFKQNFARG QAYSYDLADL GGYYADYVRA MAAFDAAQPG
AVHRVFYEAM VDDPEAGIRA LLAAAGLAFD PACLAFHATE RAVRTPSSEQ VRRPIFRDAV
DHWQRFEHRL SPLVEALGSA LSDYPSMKST EDA
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