| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0527 |
|---|
| Symbol | |
|---|
| ID | 5200664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 570829 |
|---|
| End bp | 572103 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640580068 |
|---|
| Product | succinylarginine dihydrolase |
|---|
| Protein accession | YP_001261033 |
|---|
| Protein GI | 148553451 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3724] Succinylarginine dihydrolase |
|---|
| TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.258432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTA CCGAAATCAA TTTCGACGGC CTGATCGGTC CGATGCACAA TTATGCCGGT
CTCTCCCCCG GCAACATCGC CAGCGCCACC AATGCCGGCG CGATCTCCCA GCCCCGCGCC
GCCGCGCTCC AGGGGCTCGC CAAGATGAAG CGGCTGATGG ATCGCGGCCT GGTCCAGGGT
TTCATCCCGC CGCCGCGCCG GCCCGCCGTC GCCGCGCTGC GAGCGCTCGG CTTCGGCGGC
GACGACCGAT CGGTGATCGC CCGCGCCGCC GCCGAGGACC CGGTCCTGTT CAACAACGCC
TGTTCCGCCT CGGCGATGTG GGCGGCCAAT GCGGCGACGG TGATCGCGGC CCCCGACAGC
GGCGACGGCC GGGTCCATCT CGTCACCGCC AATCTCGCGA CGATGCTGCA CCGGAGCTTC
GAGGCGCCCG ACACCTTCGC GACGCTGCGC ACCATCTTTG CCGACCAGCG CCATTTCGCC
GTCCACCCCG CCTTGCCCGG CACCCAGCAT TTCAGCGACG AGGGTGCGGC GAACCATATG
CGCATAACCC CGCGCCACGG CGAACGCGGC CTCGACATCT TCGTCCACGG CGCCGCGCGC
GGCAGCCGCT TCCCCGAGCG GCAGGCGAAG CGCGCGGGCG AAGCGGTCGC CCGACTGGCC
GGCGCGGACG CCTTCCACAC GCTCCAATCG CAGGCCGCGA TCGAGGCCGG CGCCTTCCAC
AACGACGTGG TCGCCGTCGC CAACGAGCAT GTCCTGCTCG CCCATGCCGC CGCGTTCGAG
GATCGCGACG GCCTGTTCGC CGCCGCCGGC CGCGCCGTGC CCGATTTCGT CGCGGTCGAG
GTCGACAGCA TCGGATTGGA CGACGCGATC AGCTCCTATC TGTTCAACTC GCAGCTGCTG
ACCCTTCCCG AGGGCGGCAT GGCGCTGGTC CTGCCGAGCG AGACGCGCGA GAATCCGCGC
GTCTGGGCGG CGGTCGAGAC CATCCTGGCC GGCAACAACC CGATCAACGA GGCGATCGTC
GTCGACGTGC GCGAAAGCAT GCGCAACGGC GGCGGCCCCG CCTGCCTGCG GCTGCGCGTG
CCGGTCGGCG AGGAAGCGCT GCGGGCGATC GACCCGCGCT TCCTGCTCGA CGAGCGGCGG
TGGGAGGCCT TGTGCGCGCT GGTCGAGCGG CACTGGCCCG AGCGGATCGA CGCGGCCGAG
CTGGCCGATC CGGCGCTGTG GGCTGCGGCG GGCGCCGCGC ACGACGCGCT CGACACGTTG
CTCGCACGGG TTTGA
|
|---|
| Protein sequence | MTATEINFDG LIGPMHNYAG LSPGNIASAT NAGAISQPRA AALQGLAKMK RLMDRGLVQG
FIPPPRRPAV AALRALGFGG DDRSVIARAA AEDPVLFNNA CSASAMWAAN AATVIAAPDS
GDGRVHLVTA NLATMLHRSF EAPDTFATLR TIFADQRHFA VHPALPGTQH FSDEGAANHM
RITPRHGERG LDIFVHGAAR GSRFPERQAK RAGEAVARLA GADAFHTLQS QAAIEAGAFH
NDVVAVANEH VLLAHAAAFE DRDGLFAAAG RAVPDFVAVE VDSIGLDDAI SSYLFNSQLL
TLPEGGMALV LPSETRENPR VWAAVETILA GNNPINEAIV VDVRESMRNG GGPACLRLRV
PVGEEALRAI DPRFLLDERR WEALCALVER HWPERIDAAE LADPALWAAA GAAHDALDTL
LARV
|
|---|
| |