Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0523 |
Symbol | |
ID | 5200599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 567804 |
End bp | 568352 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580064 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001261029 |
Protein GI | 148553447 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.142872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGGTC CGCTGAGAAT CCGCGCGGCG CGTCCCGCCG ACGCGGAGGC GATCGCCGCG ATCTACGCTT ATTATGTCCT GACCGGGCCG ATCACCTTCG AGGTCGACCC GCCCTCGGCG GCGGAGATGG CGCGGCGCAT GACCGACATC CTGCCGCACC ATCCCTATCT GGTCGCGGAG CTGGACGGCG GCATCGCCGG CTATGCCTAT GCGACGCGGC TCTACGAACG CGCCGCCTAT CGCTGGGCGG TCGAGGCGAC CGTCTATGTC GCCCCCGGCA GCCATCGCCA GGGGATCGGC GCCGCACTCT ACCGCGCCCT GATCGCAAGC CTCGGCGAGC AGGGCTTCCG GACGGTGATC GGCAAGATCA CCCTCCCCAA TCCCGCCAGC GTGCGACTGC ACGAAAGCCT GGGCTTCGTA TGCGCGGGGG TGCTGGCAAA GATCGGCTTC AAGCAGGGCG GCTGGCACGA TGTCGGCATC TACCAGCTCG ACCTGGGCGG GCATCCGGTG CCGCCGCCGG AGCCCCGTCC GTTCCTGCCC GCCGGCTGA
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Protein sequence | MGGPLRIRAA RPADAEAIAA IYAYYVLTGP ITFEVDPPSA AEMARRMTDI LPHHPYLVAE LDGGIAGYAY ATRLYERAAY RWAVEATVYV APGSHRQGIG AALYRALIAS LGEQGFRTVI GKITLPNPAS VRLHESLGFV CAGVLAKIGF KQGGWHDVGI YQLDLGGHPV PPPEPRPFLP AG
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