Gene Swit_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0523 
Symbol 
ID5200599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp567804 
End bp568352 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID640580064 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001261029 
Protein GI148553447 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.142872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGTC CGCTGAGAAT CCGCGCGGCG CGTCCCGCCG ACGCGGAGGC GATCGCCGCG 
ATCTACGCTT ATTATGTCCT GACCGGGCCG ATCACCTTCG AGGTCGACCC GCCCTCGGCG
GCGGAGATGG CGCGGCGCAT GACCGACATC CTGCCGCACC ATCCCTATCT GGTCGCGGAG
CTGGACGGCG GCATCGCCGG CTATGCCTAT GCGACGCGGC TCTACGAACG CGCCGCCTAT
CGCTGGGCGG TCGAGGCGAC CGTCTATGTC GCCCCCGGCA GCCATCGCCA GGGGATCGGC
GCCGCACTCT ACCGCGCCCT GATCGCAAGC CTCGGCGAGC AGGGCTTCCG GACGGTGATC
GGCAAGATCA CCCTCCCCAA TCCCGCCAGC GTGCGACTGC ACGAAAGCCT GGGCTTCGTA
TGCGCGGGGG TGCTGGCAAA GATCGGCTTC AAGCAGGGCG GCTGGCACGA TGTCGGCATC
TACCAGCTCG ACCTGGGCGG GCATCCGGTG CCGCCGCCGG AGCCCCGTCC GTTCCTGCCC
GCCGGCTGA
 
Protein sequence
MGGPLRIRAA RPADAEAIAA IYAYYVLTGP ITFEVDPPSA AEMARRMTDI LPHHPYLVAE 
LDGGIAGYAY ATRLYERAAY RWAVEATVYV APGSHRQGIG AALYRALIAS LGEQGFRTVI
GKITLPNPAS VRLHESLGFV CAGVLAKIGF KQGGWHDVGI YQLDLGGHPV PPPEPRPFLP
AG