| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0516 |
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| Symbol | smpB |
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| ID | 5200490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 558845 |
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| End bp | 559327 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640580057 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001261022 |
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| Protein GI | 148553440 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.760363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCGCC CGCGTCCCGC AGAGTTCGAG AAGAAGAAAG TGGTCGCCGA GAACCGGCGG
GCGCGCTTCG ATTATTTCCT CGAGCAGTTC TTCGAGGCCG GCATCGCCCT GACCGGGACC
GAGGTGAAGT CGCTGCGCTT CGGCGAGGGA TCGATCGCCG AAAGCTATGC CGAGGTGAAG
GACGACCAGG TCTGGCTGGT CAATTCGAAC GTGCCCGAGT TCAGCCATGG CAACCGCTTC
AACCATGAGC CGAAACGGCC TCGCAAGCTG CTGCTCCACG CGCGCGAGAT CGACAAGATG
CGCAACGGCG TCTCGCGCGA GGGGATGACG CTGATCCCGC TGTCGATCTA TTTCAACGGG
CGCGGCCGGG CGAAGGTCGA GCTGGCGCTG GCCAAGGGCA AGAAGCTGCA CGACAAGCGC
GATACCGAGA AGGAACGCGA CTGGAAACGC GAGCAGCAGC GCCTGCTGCG CGATCGCGGC
TGA
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| Protein sequence | MARPRPAEFE KKKVVAENRR ARFDYFLEQF FEAGIALTGT EVKSLRFGEG SIAESYAEVK
DDQVWLVNSN VPEFSHGNRF NHEPKRPRKL LLHAREIDKM RNGVSREGMT LIPLSIYFNG
RGRAKVELAL AKGKKLHDKR DTEKERDWKR EQQRLLRDRG
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