Gene Swit_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0514 
Symbol 
ID5200488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp556154 
End bp558199 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content67% 
IMG OID640580055 
Productendothelin-converting protein 1 
Protein accessionYP_001261020 
Protein GI148553438 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.296446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT TCCTGATCGC TCTCGCGGCG AGCAGCATGC TCGTGCCCGT GGCGGCGCCG 
ATCGCCGGCG ATGCCGCGCG CGCCGCGCCG GCGAAGGCCA CGGCCAAGCC GACCTATGGC
GATTTCGGCT TCGACGCCGC CGGCATGGAT CGCAGCGTCC GCCCCGGCGA CGATTTCTAC
GCCTATGCCA ATGGCGATTG GGCGAAGGAC ACGCCGATCC CGGCGGATCG GTCGAACTTC
GGCATGTTCA CCGTGCTGGA CGAACTGTCG ATGGCGCGCA GCCACGACAT CCTCGAACGG
GTCGCGAAGA CGCGCGGCAC CCGGATCGGC GACCTCTACG CCAGCTTCAT GGACGAAGCG
GCGGTCGACG CCGCCGGGAT CGCGCCGCTC AAGCCGCTGC TCGACGCGGT CAAGGCGATC
GACGACCGGT CCGCGGTCGC GGCGAAGATG GGCGACTATC TGCGCCTCGG CATCCGGACG
CCGTTCCGCG CCTTCGTCGA CCAGGACGAC AAATATCCCG AAAGCTATAT CGCGATCGTG
CGGCAAAGCG GGCTCGGCCT GCCTGATCGC GACTATTATC TGAAGCCTGA TACCGACATG
GCGAAGACGC GCGCGGCCTA TCAGGCCTAT GTCGCGCAGC TCCTGACCCT GGCGGGCGAG
CCGCGCGCCG ACGAGCGGGC GGCGGCGATC CTCGCCTTCG AGACCGAGCT GGCCAAGGTC
CAGTGGACCC GCGTCGATTC GCGCGACAGC ACCAAGACCT ACAACAAATG GACGCGCGGC
GACTTCGCGA GGAACGCGCC CGGCTTCGAC TGGGACGCCT ATCTGAAGGC GGCGGGCCTC
GACGGCCAGG CCGATTATCT GGTCGGCCAG CCCAGCGCCT TCGCCGGCAT GGCCAGGGCG
ATCGCGGCGG CGCCGGTCGA GCTGCTCAAG GATTATCTGC TGCTGGCGGC GATCAACGCC
GAGGCGCCCT ATCTGTCGAA GCCGTTCGTC GATGCCGAGT TCGCCTTCAA CCAGACGGTG
CTGTCGGGCA CCCCGCAGAA TTCCGAGCGC TGGAAGCGCG GCGTCACGCT GGTCAAGGAA
CAGGTCGGCG AGGATCTGGG CCAGGAATAT GTGAAGCTCT ACTTCACCCC CGAGACCAAG
GCCGCCGCCG ACGAGCTGGT CCGCAACGTC ATCGCCGCGA TGGGTCGACG GATCGACGGG
CTGAGCTGGA TGTCGCCCGA GACCAAGGTG AAGGCGCGCG CCAAGCTGGC CGCCTTCACG
CCCAAGATCG GCTATCCGAG CAAGTGGCGC GATTATTCTG CGCTGGAGAT CCGGCGCGGC
GACCTGCTCG GCAACGTGCT GCGCGCCAGC GCCTTCGAAT GGCGACGCAA CCTGAACAAG
CTGGGCCGGC CGATCGACCG GACCGAATGG GGCATGACCC CGATGGAGAT CAACGCCTAC
GCCAATTTCG CGATGAACGA GATCGTCTTC CCCGCGGCGA TCCTGCAGCC GCCCTTCTTC
GATCCGCATG CCGATCCGGC GGTCAATTAT GGCGGCATCG GCGCGGTGAT CGGGCATGAG
ATCAGCCATC ATTTCGACGA CCAGGGCGCC AAGTACGACA TGCACGGCCG GCTGTCCGAC
TGGTGGACCG CCGACGACGT CAAGCGCTTC GGCGTGCTGA CCGACCGGAT CGTCAAGCAA
TATGACGCCT ATGAGCCGCT GCCCGGCCTG CACATCCAGG GCGCGCTGAC CCAGGGCGAG
AACATCGCCG ATCTCGCCGG CCTGACCGTC GCCTATGAGG CCTATCAGAT GGCGCTGAAG
GGGCGGAAGG CGCCGGTGAT CGACGGCTTC ACCGGCGACC AGCGCTTCTA TCTGGGCTGG
GCGCAGGTGT GGCGCCGCAA CTATCGCGAG GCCAATCTGC GGCAACGGCT GCTCACCGAT
CCGCACTCGC CCTCGATCCA GCGCGCCTGG GTCGTCCGCA ACCTCGATCC CTTCTACGAG
GCCTATGACG TGAAGGCCGA CGAGAAGATG TACCTCGCGC CGGCGGATCG CCTGCACATC
TGGTAG
 
Protein sequence
MKIFLIALAA SSMLVPVAAP IAGDAARAAP AKATAKPTYG DFGFDAAGMD RSVRPGDDFY 
AYANGDWAKD TPIPADRSNF GMFTVLDELS MARSHDILER VAKTRGTRIG DLYASFMDEA
AVDAAGIAPL KPLLDAVKAI DDRSAVAAKM GDYLRLGIRT PFRAFVDQDD KYPESYIAIV
RQSGLGLPDR DYYLKPDTDM AKTRAAYQAY VAQLLTLAGE PRADERAAAI LAFETELAKV
QWTRVDSRDS TKTYNKWTRG DFARNAPGFD WDAYLKAAGL DGQADYLVGQ PSAFAGMARA
IAAAPVELLK DYLLLAAINA EAPYLSKPFV DAEFAFNQTV LSGTPQNSER WKRGVTLVKE
QVGEDLGQEY VKLYFTPETK AAADELVRNV IAAMGRRIDG LSWMSPETKV KARAKLAAFT
PKIGYPSKWR DYSALEIRRG DLLGNVLRAS AFEWRRNLNK LGRPIDRTEW GMTPMEINAY
ANFAMNEIVF PAAILQPPFF DPHADPAVNY GGIGAVIGHE ISHHFDDQGA KYDMHGRLSD
WWTADDVKRF GVLTDRIVKQ YDAYEPLPGL HIQGALTQGE NIADLAGLTV AYEAYQMALK
GRKAPVIDGF TGDQRFYLGW AQVWRRNYRE ANLRQRLLTD PHSPSIQRAW VVRNLDPFYE
AYDVKADEKM YLAPADRLHI W