Gene Swit_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0501 
Symbol 
ID5198115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp539227 
End bp539661 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content69% 
IMG OID640580042 
Producthypothetical protein 
Protein accessionYP_001261007 
Protein GI148553425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.16342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.846398 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT ATGCGAAGGA CGAGGCGCGT ATCCGCGAGA TCGTCGAGCA GATGTTCGAG 
GCGATCAACT GGTCCGCCGA CAAGGCCCCC GATTTCACCG CCTTCGCGGC CGCCGTGCGC
AAGGACGCGC TGCTCGCCCC CTCGGCCCGC CCGGTCAGCC CGACCGACAT CGAGACCTTC
GTCGGCCGGA TGCGCGGGCA ATATGAGAGC GGGGGCATGA AGACCTTCGA CGAGCGCGCC
AACAAGACGA TCGTCAAGGT CTTCGGCAAC CTCGCCGTGG CGATCGGCAG CTACCGGGCG
CAGATCGACG GCGGCCCGAT CGGCCGCGGC GCGAACGGCT TCCTGCTGGT CCGCAACGAC
GGCGACTGGC AGATCGCGGC GATGGGCTGG GACAGCGAGG GCGAGGACAA GCCGATGCCC
GCCGAGCTGG CCTGA
 
Protein sequence
MADYAKDEAR IREIVEQMFE AINWSADKAP DFTAFAAAVR KDALLAPSAR PVSPTDIETF 
VGRMRGQYES GGMKTFDERA NKTIVKVFGN LAVAIGSYRA QIDGGPIGRG ANGFLLVRND
GDWQIAAMGW DSEGEDKPMP AELA