| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0483 |
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| Symbol | |
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| ID | 5199985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 517912 |
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| End bp | 519090 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580023 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001260989 |
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| Protein GI | 148553407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.540939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCA GCAAGATCGC CCTGCTTTCG GCTGTTTTCC TGATGGCGGC CATCCCGGCC
GAGGCCGCCG CGCCGCCGTT CGACACGCCC GCGCCGGTCG CGTTCCTCAA GGATCTTTCG
TCGGGCGCGA TCCTCTACGC CAAGAATCCC GACCTGCGCA TGCCGCCGGC GTCGATGGCG
AAGATGATGA CCGTCTATGT CGCCTTCGAC CTGATCCAGA AGGGCGAGCT CAAGCTCGAC
GCCATGGCCA CCGTCCGGCC CGAGACGTGG AAGCAGTGGC ACGGCCCGGC GGCGGGATCG
ACCATGTTCC TGTCCCCCGG CGAGCAGGTG AGCGTCGCCA ACCTGCTGTT CGGCATCGTC
ACCCTGTCGG GCAACGACGC CTGCGTCGTG CTGGCCGAGC ATATCTCGGG CACCGAGCAG
GCGTTCGTCG CGCTGATGAA CCGCCGCGCC AAGGAGATGG GGCTGACCAA CAGCCATTTC
GGCACGTCGA ACGGCTGGCC CGACGGCGGC GCCACCTACG TCACCGCGCG CGACCTCGCG
ACGCTCGCCG AGAAGACGAT CGAGGAGCAC CCCAAGCTCT ACAAGACCTT CTACAGCCGC
CCCAGCTTCA CCTGGGGCAA GACGATGGGC GGCGGGCAGG ACATCACCCA GGCGAACCGC
GACCCGCTGC TCGGCCGCGT GGCGGGCGCC GACGGCCTCA AGACCGGCCA TACCGAGGAG
GCCGGCTTCG GCTTCACCGG CTCGGCCGAG CAGAATGGCC GCCGTCTCGT CATGGTCCTG
TCGGGACTGA CCTCGTTCAA CCAGCGGATC GACCAGTCGG TCTCCTTCAT GAACTGGGGC
TTCCGCTCCT GGCAGTCGAA GCCGGTCGTG CCGAAGGGCC GCAAGGTGCA GACTGCCGAG
GTCCAGCTCG GCGACGAGCG CGAGGTCGGC CTGGTCGCGC CGAAGGACCT GGTCGTCACC
GTCCCGGCCG GGCTGGGTTC GGACCTCAAG ACCAAGGTGG TCTATCAGGG GCCGATCAAG
GCGCCGTTCA AGAAGGGCGA CCATATCGCC GACCTCGTCG TCAGCGGTCC CGACATGGTG
CCGCAGAAGC TGCCGCTCGT CGCCGACCAG GACGTCGGCA CGGCCGGCTT CTTCAACCGG
ATGATGGCGG GCCTGCGCTG GCTGTTCGGC CTCGCCTGA
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| Protein sequence | MTRSKIALLS AVFLMAAIPA EAAAPPFDTP APVAFLKDLS SGAILYAKNP DLRMPPASMA
KMMTVYVAFD LIQKGELKLD AMATVRPETW KQWHGPAAGS TMFLSPGEQV SVANLLFGIV
TLSGNDACVV LAEHISGTEQ AFVALMNRRA KEMGLTNSHF GTSNGWPDGG ATYVTARDLA
TLAEKTIEEH PKLYKTFYSR PSFTWGKTMG GGQDITQANR DPLLGRVAGA DGLKTGHTEE
AGFGFTGSAE QNGRRLVMVL SGLTSFNQRI DQSVSFMNWG FRSWQSKPVV PKGRKVQTAE
VQLGDEREVG LVAPKDLVVT VPAGLGSDLK TKVVYQGPIK APFKKGDHIA DLVVSGPDMV
PQKLPLVADQ DVGTAGFFNR MMAGLRWLFG LA
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