| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0477 |
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| Symbol | |
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| ID | 5200158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 510406 |
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| End bp | 511737 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640580016 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001260983 |
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| Protein GI | 148553401 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.727479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATGG AAAAGGGACG GATCAGGGAT TGGCTCGTCG TGCTGCTGCT GATGGCCGCC
CTGATCCTGT CCTTCGTCGA TCGGATCGGC CTGTCGCTGC TGGTCGATCC GATCCGGGCC
GACCTGGGCA TCAGCGATGC CGAGATCGGC CTGCTCCAGG GCATCGCCTT CGGCCTGTTC
TTCGCGGTGA TGGGGCTGCC GCTCGGCTGG CTCGCCGATC GCTGGTCGCG CAAGGGCACG
ATCATGCTCG GCGTCGGCAT GTGGTCGGTC GCGACGGCCG CCTGCGGGCT CGCCGCCAAC
TTCCCCCAAC TGCTGCTCGC GCGGATCGGG GTCGGGGCGG GGGAGGCGGG GCTCGCCCCC
GCCAGCTATT CGATCGTCCA TGACCGCTTC CCGCGCGAGC AGCTCGGCCG CGCGATCAGC
CTGTTCCAGG TCGGCGGCGT GCTCGGCGCC GGGCTGGCGC TGCTGATCAC CGGCTATGTC
TATCGCTATT TCACCGGCGG GGGCGGGGCG GACCTACCCC TGATCGGCGG GTTGCGGCCG
TGGCAGCAGA CCTTCCTCGC CATCGCCACG CCGGGGCTGC TCTTCCTGAT CCTGATCGCG
ATGATCCGCG AGCCCGAGCG GGTCGCCGGG CCGGCCGACG CCGCCGGAGC CGGCGAGCCG
CGCGGCTTCG CGGCGATGGT CGCGGCGGTC CGGGCGCGCA TCGGCCTCTA TCTGCCGCTG
TTCGTCGGCA TGTCGGGGGT GATCATGACC AGCTATGCGC TGGTGTCGTG GATGCCGGCG
GTGCTCGGCC GCGAGTTCCA CTGGCCGGCC GAGGTGATCG GGGTGCGCTA CGGGCTCGTC
GTGCTGTCGG CGAGCCCGGT CGGGCTGCTC ACGGGCGGAT GGCTCGCCGA TGCGCTGCTG
CGCTCGGGAA GCGTCAATGC GCATGTCCGC GTCGTCGCGC TGGCGGCGCT GCTCGGCCTG
CCGTTCGCGC TCGCGCTCGC CCTGCCGAGC GGCCCGGTGG GGCTGTTGCT GGTCGTGGGC
GGTCTCCATT TCGCGGCCTC GATGCCGATG GGCGTGGTGC CCGCTTTCCT CCAGCTCGCG
ACGCCGCCGG CCGCGCGGGC ACAGGTGTCG GGCCTCTATG TGCTGTTCAT CAACGTCGTC
GGGCTCGGGC TCGGGCCGAC CCTCGTCGGC CTGCTGTCGA CCGGCATGGG CCCCGACGCC
GCCTCGCTCA GGCTCTCGAT GGCGCTGGTG ATCGGCCCTG CGATGCTGGT CGCGACGGCT
GTGCTGGCCT GGTTGGCCCG CTCGACGCGG CACGAATCCG TGGCGGACGT CCGCCCGGCC
TACGGCTCAT AA
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| Protein sequence | MHMEKGRIRD WLVVLLLMAA LILSFVDRIG LSLLVDPIRA DLGISDAEIG LLQGIAFGLF
FAVMGLPLGW LADRWSRKGT IMLGVGMWSV ATAACGLAAN FPQLLLARIG VGAGEAGLAP
ASYSIVHDRF PREQLGRAIS LFQVGGVLGA GLALLITGYV YRYFTGGGGA DLPLIGGLRP
WQQTFLAIAT PGLLFLILIA MIREPERVAG PADAAGAGEP RGFAAMVAAV RARIGLYLPL
FVGMSGVIMT SYALVSWMPA VLGREFHWPA EVIGVRYGLV VLSASPVGLL TGGWLADALL
RSGSVNAHVR VVALAALLGL PFALALALPS GPVGLLLVVG GLHFAASMPM GVVPAFLQLA
TPPAARAQVS GLYVLFINVV GLGLGPTLVG LLSTGMGPDA ASLRLSMALV IGPAMLVATA
VLAWLARSTR HESVADVRPA YGS
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