| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0475 |
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| Symbol | |
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| ID | 5196576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 506584 |
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| End bp | 508626 |
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| Gene Length | 2043 bp |
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| Protein Length | 680 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640580014 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001260981 |
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| Protein GI | 148553399 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCA TAGGGTTCGA CGTGGGCGGG ACCTTCACCG ACTTCACCAT GCTCGATGAA
GGGCGCGGCT CGGTCCATTA TTTCAAGGTG CCTTCGACGC CGCACGATCC GTCCGAGGCG
ATCGGAACCG GGCTGTCGGC GCTGATCGCC GATCATGGCA TCGATCCGGC GCTGATCCGC
CATCTCGGCC ATGGCACCAC GGTCGCGACC AACATGGTGA TCGAGCGCAG GGGCGCGCTG
ACCGGGTTGA TCACGACGCG CGGCTTCCGC GACACGCTCG AGATCGGCCG CCAGACCCGC
CCGCATCTCT ACGACTATTC GGTCAGCCGG CCGACCCCGC TGGTCCCGCG CGACCTGCGC
CTGGAGGTCG ACGAGCGGAC CCTATCCGAC GGCACGGTCG AGCTTCCGCT CGACGAGGAG
CAGGTCGCCG AGGCCGCCCG TAAGCTCGGC GAGGCCGGGG TCGGCGCGGT GGTGATCTGC
TTCCTGCACA GCTATCGCCG CCCGGACCAT GAGCGTCGCG CCGGGGAGAT CGTCCGCGCG
ATCCTGCCCG ACGCCTATAT CAGCCTGTCG TCGAACGTCC TGCCCGAATT CCGCGAATAT
GAGCGCATGT CCACGACCGT GCTCAACGCC TATATGGGCC CGCGCATGGG CACCTATCTG
GAACGGCTGC TCGGCCGGGT CGGCGATCTC GGCATCACCG GCGAGCTCGA CACCGTCCAT
TCGAACGGCG GCCTGATGTC GGTGCCGACG GTGCGCGAGA TCCCGGTGCG GACCTGCGTG
TCGGGCCCGG CGGCCGGCGT GATCGGCGCG GCGGAGATCG GCCGCTTCGC CAATTTCCCC
AACCTCGTCA CCTTCGATGT CGGCGGCACC TCGACCGACG TGTCGGTCAT CGTCGGCGGC
AAGCCGCTGT TCGCGTCGGA CAGGCTCGTG GCGGACTATC CGGTCAAGAC GCCGATGATC
GACATCCACG TCATCGGCGC GGGCGGCGGC AGCATCGCCG CGATCGACGA CGCCGGCGCG
CTGAAGGTCG GCCCGCGCAG CGCCGGCGCG GCGCCCGGCC CGGTCGCCTA TGGCCGCGGC
GGCACCGAGC CGACCATCAC CGACGCGAAC ATCGTGCTCG GCCGGCTCGA TCCGGTCGCG
CTGCTCGAAG GGCGCCTCCC GGTCGACGCC GCCGCGGCGC GCGCGGTGAT CGAGGAACGG
ATCGCGCGGC CGCTCGGCCT GTCGGTCGAG GAGGCGGCCT ATGGCATCCT GCGCATCGCC
AACGCCAATA TGAGCCGCGC GATCCGCTCG GTCTCGACCG AGCGGGGCCA CGACATCCGC
GACTTCGCGC TGTTCGCCTA TGGCGGCGCC GGGCCGCTCC ATGCCTGCGA CCTCGCCCAG
GATTGCGGCA TCCGCACCGT GCTGGTACCG CAGGAGCCGG GGACGCTGTG CGCGCGCGGC
ATCCTGCTGT CGGACATCAA CATGGACTTC GTCCGCAGCG AGCTGAGCCT GGCCGCCGAC
GCCTCCTGGC GGCGCGTCTG CGCGGTGCTC GGCGAGATGC GCGACGAGGC GACCGCCTGG
CTGGTCCGCG AAGGCGTGGC CGAAGAGGAC CGCCAGCTCC GGATCATGGT CGACGCACGC
TATGACGGCC AGAATTTCGA GGTGTCGGTG CCGCTCGACG ACGTCCGCGA GGACGGGCTC
GACGACATGG TCCAGCGCTT CCGCCGCCAG CATGTCCAGG AATATGGCTA TGACGTGTCC
GACCGCCCGG TCGAGATCGT CAACTGCCGC ATCCAGGCGA TCGGCCGGGT CGCGCGGGTG
CCGGTCTCGG CGCCGGTGCC GGTGCCCGGC CTCGACGCCG TCAAGGGCCG CCGCCCGGTC
TATTTCGGCA AGGATGCCGG CTGGGTGGAG ACGTCGATCT ACCGCCGCGG GCAATTGCCC
ATCGGGCGCA CCTTCGCGGG GCCCGCGATC ATCGAGGAGA TGAGCTCGAC CCTCATCGTC
CAGCCCGGCC AGACCATCAC GGTCGATCCG GTCGGCAACC TCATCGTTTC GATCTTCGAA
TAG
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| Protein sequence | MYRIGFDVGG TFTDFTMLDE GRGSVHYFKV PSTPHDPSEA IGTGLSALIA DHGIDPALIR
HLGHGTTVAT NMVIERRGAL TGLITTRGFR DTLEIGRQTR PHLYDYSVSR PTPLVPRDLR
LEVDERTLSD GTVELPLDEE QVAEAARKLG EAGVGAVVIC FLHSYRRPDH ERRAGEIVRA
ILPDAYISLS SNVLPEFREY ERMSTTVLNA YMGPRMGTYL ERLLGRVGDL GITGELDTVH
SNGGLMSVPT VREIPVRTCV SGPAAGVIGA AEIGRFANFP NLVTFDVGGT STDVSVIVGG
KPLFASDRLV ADYPVKTPMI DIHVIGAGGG SIAAIDDAGA LKVGPRSAGA APGPVAYGRG
GTEPTITDAN IVLGRLDPVA LLEGRLPVDA AAARAVIEER IARPLGLSVE EAAYGILRIA
NANMSRAIRS VSTERGHDIR DFALFAYGGA GPLHACDLAQ DCGIRTVLVP QEPGTLCARG
ILLSDINMDF VRSELSLAAD ASWRRVCAVL GEMRDEATAW LVREGVAEED RQLRIMVDAR
YDGQNFEVSV PLDDVREDGL DDMVQRFRRQ HVQEYGYDVS DRPVEIVNCR IQAIGRVARV
PVSAPVPVPG LDAVKGRRPV YFGKDAGWVE TSIYRRGQLP IGRTFAGPAI IEEMSSTLIV
QPGQTITVDP VGNLIVSIFE
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