| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0467 |
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| Symbol | |
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| ID | 5200103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 498513 |
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| End bp | 499646 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640580006 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_001260973 |
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| Protein GI | 148553391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGACA GTCCCGGTAT CCTCTTCACG ATATTGGCTT TCCTGCTCGT CATTGGGCCG
TTGATCTTCG TCCACGAGCT CGGCCATTAC CTGGCCGGAC GCTGGTGCGG GGTGAAGGCC
GACGTCTTCT CCATCGGCTT CGGGCGGGAG ATCGCCGGCT ATACCGATTC GCGCGGCACC
CGCTGGAAGC TGGGCTGGAT GCCGATGGGC GGCTATGTGA AGTTCGCCGG CGACATGAAC
CCTGCGAGCG TGCCGACCCC CGAATGGCTC GCCCTGCCGC CCGAGGAGCG CGCCAGGACC
TTCCAGGCCA AGCCGGTCTG GCAACGCTTC CTGATCGTCT TCGCCGGGCC GTTCACCAAT
TTCGTCGTCG CGATCGGCAT CTTCATGGCC TTCTTCGCGG CCTATGGCGC GCCGCGCACC
CCCTCGGTGG TGTCGGCGGT GATCGAGGGA TCGCCGGCCG CGCGGGCTGG GATGCAGCCC
GGCGATCGGG TCGTCGCGAT CGAGGGGCGG CCGATCGAAC GGTTCGACGA CCTCGCCGAC
ATGATCCGCT TCCGCCCCGA CGAGCGGCTG CGGATCGACC TGGTCCGCGG ATCTGAGACG
AGGACGCTGT TCGTCGTGCC GGTCGCCAAT GTCGAGCGCG ATCGCTTCGG CAACGAATTC
CGCAAGGGCA CGATCGGCGT GCTGTCGGGC CCGCAGATCG TGGTGCCGGT GCCGCTTCAC
GAGCTTCCGG TGGAGGCGAC CCGTCAGACC TTCGGTATCG TCCGGATGAT GGTCGACACG
CTCGGCCAGA TCGTCACCGG CCGCCGTTCG GTCAAGGAAT TGGGCGGTCC GATCAAGATC
GCCCAGGTCT CCGGCCAGCA GGCGTCGCTG GGCCTGCTCA ACTTCGTCAT GTTGATGGCT
CTCATTTCGA TTAATCTGGG ATTCATCAAC CTATTGCCAA TCCCCATGCT CGACGGTGGC
CATCTGGTCT TCTACCTGTT CGAGGGAATA GCGCGCCGGC CCGTGCCGGA AAGGGCGATG
GAATGGGCGT TTCGATCGGG TCTGGCGGTG CTGCTGTCGT TCATGATCTT CGTGACGCTC
AACGATATTC TCTCGCTGGG GGCGCTGGAG CGGCTTGCCG GGTTGATCGG CTGA
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| Protein sequence | MTDSPGILFT ILAFLLVIGP LIFVHELGHY LAGRWCGVKA DVFSIGFGRE IAGYTDSRGT
RWKLGWMPMG GYVKFAGDMN PASVPTPEWL ALPPEERART FQAKPVWQRF LIVFAGPFTN
FVVAIGIFMA FFAAYGAPRT PSVVSAVIEG SPAARAGMQP GDRVVAIEGR PIERFDDLAD
MIRFRPDERL RIDLVRGSET RTLFVVPVAN VERDRFGNEF RKGTIGVLSG PQIVVPVPLH
ELPVEATRQT FGIVRMMVDT LGQIVTGRRS VKELGGPIKI AQVSGQQASL GLLNFVMLMA
LISINLGFIN LLPIPMLDGG HLVFYLFEGI ARRPVPERAM EWAFRSGLAV LLSFMIFVTL
NDILSLGALE RLAGLIG
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