| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0460 |
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| Symbol | rpsB |
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| ID | 5199514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 492597 |
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| End bp | 493349 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579999 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_001260966 |
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| Protein GI | 148553384 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.968608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGCTC CCACCGTCTC CATGCAGGCG TTGCTCGACG CCGGCGCGCA TTTCGGTCAC
CAGACCCACC GCTGGAATCC GAAGATGAAG CCGTATCTGT TCGGCGACCG CAACGGCATC
CACATCATCG ACCTGTCGCA GACCGTGCCG CTGATGGCGC GCGCGCTCGA TTTGATCAGC
CAGACCGTCC AGCACGGCGG CAAGGTCCTG TTCGTCGGCA CCAAGCGCCA GGCGCAGGAG
CCGATCGCCG AGGCCGCGCG CCGGTCGGGC CAGCATTATG TCAACCATCG CTGGCTGGGC
GGCATGCTCA CCAACTGGAA GACCATCTCG AACTCGATCA AGCGCTTCAA GGCGCTCGAG
GAGCAGCTGT CGGGCGACAC CCATGGCCTG ACCAAGAAGG AAGTCCTCCA GCTCACCCGC
GAGCGCGACA AGTTCGAGCT GTCGCTCGGC GGCATCCGCG ACATGGGCGG CATCCCGGAC
GTGATGTTCG TGATCGACGC CAACAAGGAA GAGCTGGCGA TCAAGGAAGC CAACACGCTC
GGCATCCCGG TCGTCGCGAT CCTCGATTCG AACGTCAGCC CGGACGGCAT CGCCTTCCCG
GTTCCCGCCA ATGACGACGC CGCCCGCGCG ATCCGTCTCT ATTGCGAGGC TGTCGCCGAG
GCCGCGACCC GTGGCGCCCA GGGCGGCCGT CAGGCCCGCG GCGAGGATCT CGGCGCCGCC
GTCGAGGCTC CGAGCGAAGA CGCGCTCGCG TAA
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| Protein sequence | MAAPTVSMQA LLDAGAHFGH QTHRWNPKMK PYLFGDRNGI HIIDLSQTVP LMARALDLIS
QTVQHGGKVL FVGTKRQAQE PIAEAARRSG QHYVNHRWLG GMLTNWKTIS NSIKRFKALE
EQLSGDTHGL TKKEVLQLTR ERDKFELSLG GIRDMGGIPD VMFVIDANKE ELAIKEANTL
GIPVVAILDS NVSPDGIAFP VPANDDAARA IRLYCEAVAE AATRGAQGGR QARGEDLGAA
VEAPSEDALA
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