| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0454 |
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| Symbol | |
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| ID | 5196510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 484418 |
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| End bp | 486202 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579993 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001260960 |
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| Protein GI | 148553378 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.400108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.559822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTAC CCATTCATTC CGCGGCTTTC AGCGATTCGC TCGTCGTCCT GGGCACCGCG
GGCCTCGTCA TCCCCGCCTT CGCCCGCTTC CGCATCACCC CCGTCATCGG CTTCATCCTG
GTCGGCATGC TGGTGGGCCC CAACGGTCTG GGCCGGCTGA TCGATGAGGT TCCGTGGCTC
TATTATGTGA CGATCGGCAA TCCGCGCTCG ATCGAGCCCT TCGCCGAGTT CGGCATCGTC
CTGTTGCTCT TCTCGATTGG CCTCGAGCTG AGCTTCAAGC GATTATGGGG CCTGCGCCGG
ACGGTGTTCG GGCTGGGCTC CTCGAAGCTG GCCCTGTCGG CGCTGCTGAT CGGCGGCGGC
CTCTGGCTGT TCGGCCAGAC GCCGAACGGC TCGTTCGGCC TCGGCCTCGC GCTGGCGCTC
TCGTCGACCG CGCTGGTGCT GCCGATGGTC GGCACCAGCG GCGCGGTCGG CCAGCGGGCC
TTCGGCATCC TCCTGTTCGA GGATCTCGCG CTGGTGCCGA TCGTGTTCAT CCTCGGCGCG
ATGGCGCCCT ATGGCGAAAC CGACGGATGG GACGGGCTGC TGTTCACGGT CGCCTCCGGG
ATCGGCGTGA TCGCGGTGAT GATGGTCGGG GGGCGGCTGA TCCTGCCCCG CCTGTTCGCG
CAGGCCGCGC GCGCCAAGAA TCCCGAGCTG TTCCTGTCGG CCAGCCTGCT CGTCGTCATC
CTCGCCAGCA TCGCGACCAC CGCGGTCGGC CTGTCGCCGA TCGTCGGCGC GCTGGTCGCC
GGCCTGCTGA TCGCCGAGAC CGACTATCAT GCCGAGGTCG ACCTGGTCAC CGCGCCGTTC
AAGGGGCTGG CGCTCGGCAT CTTCCTGATC ACCGTCGGCA TGTCGGTCGA CCCGCTGATG
ATCCTCGCCA ATTGGGACAG CGTCGCGCTG GCGGTCGTCG CGATCGTCGC CGCCAAGGCG
CTGGTCACCG CCTTCCTGCT GCGCTTCTGG GGCGCGAAGC GGGCGGTCGC GGCCGAGACC
GGGCTGCTGA TGTCCTCCCC TTCGGAAACC ACGCTGATCG TGCTCGCCAC CGCGGCGCAG
GCGCGGCTGA TCGATCCCGG CACCGCCGGC TTCTGGCAGG TGGTGACCGC GATCGGGCTG
ACGATCACGC CGATCCTCGC CAAGATCGGG CACGACATCG CCCGCCGGGT CGACGAGCGC
GAGACCGCCG CCGACCCCGA CCTGTCGGAC ACGATCCAGG CACGCGCGAT CATCGCCGGC
TTCGGCCGCG TCGGGCGGCT CGTCGCGCAG ATGCTCGATG CGCACAACAA GCCCTATATC
GCCGTCGATG CCGATATCGA CACGGTGATC AATGCCCGTC GGCGCGGCTA CAAGGCGATG
TTCGGCGATG TCGCCAAGCC GGGCATGCTC GACCATCTCG ACCTGTCGCG CTCGACCGCG
CTGATCCTGA CGATGGACGA TCCGGTGCAG GTCGTCCGCA TCACCCGGCT CGCGCGGCAG
AATTATCCCG AGCTGACGAT CGTCGCCCGC GCCCGCGATC CGAACCACGC AGCGGAACTC
TATCGCGCCG GCGCCACCGA CGCCGTGCCC GAGACGATCG AATCCTCCCT GCAATTGTCG
GAGGCGGTGC TGGTCGACCT CGCCGTGCCG ATGGGACCGG TGATCGCCTC GATCCACGAG
AAGCGCGCCG AGCTGCGCGC CAAGATCATG GAAATGGGCC AGATCGACCG CGAGCCGGCG
TTCGGCCGCC GCCGGCTGCG CGACGCCGTC CCCGAGCAGG AGTAG
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| Protein sequence | MALPIHSAAF SDSLVVLGTA GLVIPAFARF RITPVIGFIL VGMLVGPNGL GRLIDEVPWL
YYVTIGNPRS IEPFAEFGIV LLLFSIGLEL SFKRLWGLRR TVFGLGSSKL ALSALLIGGG
LWLFGQTPNG SFGLGLALAL SSTALVLPMV GTSGAVGQRA FGILLFEDLA LVPIVFILGA
MAPYGETDGW DGLLFTVASG IGVIAVMMVG GRLILPRLFA QAARAKNPEL FLSASLLVVI
LASIATTAVG LSPIVGALVA GLLIAETDYH AEVDLVTAPF KGLALGIFLI TVGMSVDPLM
ILANWDSVAL AVVAIVAAKA LVTAFLLRFW GAKRAVAAET GLLMSSPSET TLIVLATAAQ
ARLIDPGTAG FWQVVTAIGL TITPILAKIG HDIARRVDER ETAADPDLSD TIQARAIIAG
FGRVGRLVAQ MLDAHNKPYI AVDADIDTVI NARRRGYKAM FGDVAKPGML DHLDLSRSTA
LILTMDDPVQ VVRITRLARQ NYPELTIVAR ARDPNHAAEL YRAGATDAVP ETIESSLQLS
EAVLVDLAVP MGPVIASIHE KRAELRAKIM EMGQIDREPA FGRRRLRDAV PEQE
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