| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0430 |
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| Symbol | |
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| ID | 5198952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 455419 |
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| End bp | 456054 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579969 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001260936 |
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| Protein GI | 148553354 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.181107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.797798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCA AGCCGCAGCA CAAGCCCTGG TACCGCTCGC GCGGCTGGTG GCTGAAGCAG
CTCCACAATT GGCACTGGAT GAGCGCCGCC ATCTCGCTGA TCGGCATGCT GCTGTTCGCC
GCGACCGGCA TCACGCTCAA CCATGCCGCG ACGATCGCCG CTTCGCCCCA TGTCCAGAAT
CTGTCGGCGA AGCTGCCGGC GCCGCTGCTC GCCCAACTCG CCAAGCCTGC GTCGGACAGC
GCGCCGCTGC CGCCCGCCAT CGTCGCCGAG CTCGATACCA GGCTCGAGCT CAACGCCGGC
GGCAAGCCCG GCGAATGGTC CGACGACGAG GTCTATGTCG CCCTGCCCCG CCCCGGCGGC
GATGCCTGGA TCAGCATCGA CCGCGCCAGC GGAGCGGTGA CCGCCGAGAT CACCGACCGC
GGCTGGATCA GCTACCTCAA CGATCTCCAC AAGGGGCGCA ACGCCGGCGG CGCCTGGGGC
TGGTTCATCG ACGTCTTCGC CGGGGCCTGC ATCCTGTTCA CGCTGACCGG CCTGTTCCTG
CTCTACATGC ATTCCAAGCC GCGCCCCCTG ACCTGGCCGC TCGTGGGCCT GGGCCTGGTG
GTGCCGATGC TGATCGTCGT CCTCTTCGTC CATTGA
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| Protein sequence | MKRKPQHKPW YRSRGWWLKQ LHNWHWMSAA ISLIGMLLFA ATGITLNHAA TIAASPHVQN
LSAKLPAPLL AQLAKPASDS APLPPAIVAE LDTRLELNAG GKPGEWSDDE VYVALPRPGG
DAWISIDRAS GAVTAEITDR GWISYLNDLH KGRNAGGAWG WFIDVFAGAC ILFTLTGLFL
LYMHSKPRPL TWPLVGLGLV VPMLIVVLFV H
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