| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0427 |
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| Symbol | |
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| ID | 5197307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 453127 |
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| End bp | 453990 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579966 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001260933 |
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| Protein GI | 148553351 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.127952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.810308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCA GTTGGTCGGT GCGCTTCGCC GCGCCGGCCG GCTGCGATCC CGCAGCGGTC
GAGGCGGCGA TCCTCGCTAG GCTCGACACG ATCATCGCCG AGATGAGCCA CTGGCGAGCG
GATTCGCTGA TCTCCGCCTA TAACCGCGCC GAAGCCGGAA GCTGGCACAG TCTTCCCGAT
GATTTCGCGG CGGTGATCGC CACCGCGCTC GACGTCGCGG CGCGCAGTGG CGGCGCCTTC
GATCCGGCGA TCGGCCGTCT CGTCGACCTT GCCGGCTTCG GCCCCGATCC CGCCCTGCGC
AGCGACGCCG CCACGGCCCT CGCGCTCGCC CGCCAGAACG CCGGATGGCG GCGGCTGCGC
TTCCGCGACG GCCGGCTTCT CCAGCCCGGT GGGCTTACCC TCGACCTGTC GGGCATCGCC
AAGGGCCATG CCGTCGACGC GGTCGCCGAC GCGCTCGGCG CGCTCGGCAT CGCCCATGCG
CTGGTCGAGA TCGGCGGCGA GCTGGTCGGT CGCGGCGTCC GTCCCGACGG CGATCCCTGG
TGGGTCGATC TCGAGAACCC GCCCGGCAAC CCGTTGCCGC CGCTGCGCAT CGCGCTGCAC
GGCATCGCCG TCGCGACCTC GGGCGATTAT CGGCGCGGCG CGCACAGCAT CGATCCACGC
ACCGGCCGCT CGACCGATAA CGGCGTCCGC TCGGTCAGCG TGATCCACAA GAGCGCGATG
CTTGCCGACG CCTGGGCGAC CGCGCTGACG GTGGCGGGCC CCGAAGCCGG CCTCGATCTG
GCCCGGCGCG AGGGGATCGC CGCGCGGATC GTCGGCGATC GCGAATGGCT CAGCCCCGCG
CTCGTCGAAA TGCTGGAATA TTGA
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| Protein sequence | MGTSWSVRFA APAGCDPAAV EAAILARLDT IIAEMSHWRA DSLISAYNRA EAGSWHSLPD
DFAAVIATAL DVAARSGGAF DPAIGRLVDL AGFGPDPALR SDAATALALA RQNAGWRRLR
FRDGRLLQPG GLTLDLSGIA KGHAVDAVAD ALGALGIAHA LVEIGGELVG RGVRPDGDPW
WVDLENPPGN PLPPLRIALH GIAVATSGDY RRGAHSIDPR TGRSTDNGVR SVSVIHKSAM
LADAWATALT VAGPEAGLDL ARREGIAARI VGDREWLSPA LVEMLEY
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